Brevundimonas vitisensis: JIP62_02960
Help
Entry
JIP62_02960 CDS
T07812
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bvit
Brevundimonas vitisensis
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvit03400
]
JIP62_02960
Enzymes [BR:
bvit01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JIP62_02960
DNA repair and recombination proteins [BR:
bvit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JIP62_02960
Prokaryotic type
JIP62_02960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QQQ19102
LinkDB
All DBs
Position
594045..595523
Genome browser
AA seq
492 aa
AA seq
DB search
MERPRVTTKPSDETPVILWFRRDLRLADNPALNNAADTGRAIVPVYILDEAGDGRPLGAA
SKWWLDKSLRALDAALQQRGSRLILRRGDSESELRRLIDETGATTVFMNRRFEPDAWAQD
AEIAHSLKDDGVECRGTNGTLLARPGSVLNGSSQPYRVFTPFHKALMAQAEVPTHTLGPR
AISTPDHLSSDSIDDWGLHPKRPDWSAEFEGEPGEAGALAALSHFLKSGLGGYGAGRDIP
SRAATSRLSAALHWGEISPWRAVAAARGAASDGRVPGAEAEKFVSEIGWREFSAHLLHHF
PFITERAFRPEYDTMPWRDDPKSLKAWQTGQTGYPIVDAGMRQLWRTGYMHNRVRMVVAS
FLIKHLLIDWREGEAWFWDTLVDADLASNVQNWQWVAGSGADAAPYFRIFNPIAQGEKFD
AEGRYVRRWVPEIARLPDKYIHAPWTAPREILAGAGLRLGQDYPRPIVDHAEGRARALAA
LKAIDNKSDPNE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggagaggccgcgcgtgaccacaaagccgtcggacgagacccccgtcattctgtggttc
cgccgggacttgcgtctggccgacaacccggcgctgaacaatgctgcagacacaggccgt
gccatcgtgccggtgtacatcctcgacgaggctggcgacggacgcccgctgggggcggcg
tcaaagtggtggttggacaaatcgctgcgcgccctggatgcagccctgcagcagcgcggg
tcgcgcctgatcctgcgccggggcgacagcgaatcggaactgcgccgtctgatcgacgag
accggtgcgaccaccgttttcatgaaccgccgcttcgaacccgacgcctgggcgcaggac
gccgagatcgcccattcgctgaaggacgacggcgtcgaatgccgtggcaccaacggcacc
ttgctggcccgtccaggcagcgtcctgaatggctcgagccagccctatcgcgtattcacg
cccttccataaggcgctgatggcccaggccgaagtgccaacgcataccctgggtcccagg
gcgatcagcacgcccgatcacctgtccagcgacagcattgacgactggggcctgcacccc
aagcggcccgattggtccgccgagttcgaaggcgagcccggcgaggcgggggcgcttgcg
gcgctgtcccactttctgaagtccggcctcgggggctatggggcgggtcgcgacatccct
tcgcgggcggcaaccagtcgcctgtccgccgccctgcactggggcgagatcagtccctgg
cgagccgtggcggcggcgcgcggggccgcatcagatggccgcgtgccgggcgcagaggcc
gagaaattcgtctccgagatcggctggcgcgagttttcggctcacctgctgcaccatttc
cccttcatcaccgagcgggcattccggccggaatacgacaccatgccctggcgggacgat
cccaagtcgctgaaggcctggcagacaggtcagaccggctatcccatcgtcgacgcaggc
atgcgccagctttggcggaccggatacatgcacaatcgggtgcggatggtggtggcatct
ttcctgatcaagcacctgctgatcgactggcgcgagggcgaggcctggttctgggacacg
ctggtcgatgccgatctggcgtcaaatgtgcagaattggcagtgggtcgcgggatccgga
gccgatgccgctccgtatttccgtatcttcaatccgattgcacagggcgaaaagttcgat
gccgaaggccgctatgtccgtagatgggtgcccgagattgcccggctgccggacaaatac
atccacgcgccctggacggcaccgcgcgaaatcctcgcgggggcgggcctgcgcctgggg
caggactatcctcgtccgatcgtcgaccatgccgaagggcgggcacgcgccctggcggcg
ctcaaagccatcgacaacaagtccgatcccaatgaatga
DBGET
integrated database retrieval system
