Brevundimonas vitis: JIP62_03030
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Entry
JIP62_03030 CDS
T07812
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bvit
Brevundimonas vitis
Pathway
bvit03410
Base excision repair
bvit03430
Mismatch repair
bvit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JIP62_03030 (recJ)
03430 Mismatch repair
JIP62_03030 (recJ)
03440 Homologous recombination
JIP62_03030 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvit03400
]
JIP62_03030 (recJ)
DNA repair and recombination proteins [BR:
bvit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JIP62_03030 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JIP62_03030 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JIP62_03030 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DUF6724
Motif
Other DBs
NCBI-ProteinID:
QQQ19112
UniProt:
A0ABX7BPD0
LinkDB
All DBs
Position
complement(606064..607866)
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AA seq
600 aa
AA seq
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MADGGTTPGFLGVSRSLSGRAWRQRPAEASVVRAHVQTLGLSELLGRALAARGVRADQGG
DFLVPTLKALFPDPSSFMDMDAAAVALIDALQAGAAIHVFADYDVDGASSAALLVRWFRA
MGTELSIYVPDRMTEGYGPSPRAFDTLKALGADLVVTVDCGAAANEALAYADSIGLKVVV
IDHHMMRAEPPKALAVVNPNRPGCNSGQGNLAAAGVVFVLLAALNREARARGLFADREQP
DIRQWLDLAAMGAICDVTGLTGFNRALTSLGLRVMSQWANPGLRALLAAAKGEPGPAKTN
HAGFILGPRINAGGRIGRSDLGARLLATDDEAEARDLAEQLDALNIARREVERTVTEEAI
RRVEATGAHQDDSACIVVAGDDWHPGVVGVAAGRLRERWRKPVVVIGVDPVTGIGKGSGR
SQPGMNLGRAVQAAWESGLLLAGGGHAMAAGLTIKAADIETLSAFLNDRLAGEVAQAVAL
DWVEIDALIDPAGATRDLFEDFERLAPFGPANPEPLFAMTGVTAREPVAMNGGHVRCRLV
GADGASVKAIAWRCADLPGGRALLEGQGGLAVVGRLKADDWNGRRSVQFEIEDIADPRML
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggcgggaccacgcccggctttcttggcgtgtcccgctccctgtccggtcgt
gcctggcgccagaggccggccgaagcgtcagtggtccgtgcccatgtccaaaccctcggc
ctgtccgaacttctggggcgggctctggcggcgcggggcgttcgcgcggatcaggggggc
gacttcctggtgcccacgctgaaggcgctgttccccgatccctccagcttcatggacatg
gatgcggctgcggttgcgttgatcgatgcgctgcaagctggtgcggcgatccacgtcttt
gccgactatgatgtcgacggcgcatccagcgcggccctgctggtgcgatggttccgggcc
atgggcaccgaactgtccatctatgtccccgaccgcatgaccgagggctatgggcccagc
ccccgggccttcgataccctgaaggccctcggtgccgatctggtggtgacggtcgattgt
ggcgcagcggccaacgaagcgctggcctatgccgattcgatcggcctgaaggtcgtggtc
atcgaccatcacatgatgcgggctgagccgcccaaggcgctggccgtggtcaaccccaac
cggccggggtgcaattcaggccagggcaatctggccgcggcgggcgtcgtgttcgttctg
ctggccgcgctgaaccgagaggcacgggctcggggcctgtttgctgatcgggaacagccg
gatatccgccagtggctggacctggccgccatgggggcgatttgcgacgtgacgggccta
acggggttcaaccgcgccctgaccagcctgggcctgagggtcatgtcccaatgggcaaat
cccggcctgcgtgccctgctggcggcggccaagggtgagccggggccggccaagaccaat
catgcgggcttcatcctgggaccgcgcatcaatgccggtggccggatcggccgatcggac
ttgggggcacgactgctggccaccgacgatgaagccgaagcccgcgacctggctgaacag
ctggatgccctgaacatcgcccggcgcgaggtcgagcgcaccgtgacggaagaagcgatt
cggcgcgtcgaggcgaccggggcccaccaggacgacagcgcctgcatcgtcgtggccggt
gacgactggcatccgggcgtggtcggcgtggcggcgggtcgattgagagagcgctggcga
aagccggtggtggtcatcggagtggatccggtcacgggcatcggcaagggctctgggcgg
tcccagccaggcatgaatctgggccgtgcggtccaggccgcctgggagagcgggctgctg
ctggctggcggcgggcacgccatggcggcgggcctgaccatcaaggcggccgatatcgag
accctgagcgcctttctgaacgatcgcctagccggagaggtggcccaggccgtggccctg
gattgggtcgagatcgatgccttgatcgatccggctggtgcaacgcgggacctgttcgag
gattttgagcggctggcgccattcggtccggccaaccccgagcccttgttcgctatgaca
ggcgtgacggcccgcgagcctgtcgccatgaacgggggtcatgtgcgctgccgtctggtc
ggtgcggacggggcctcggtcaaggcgatcgcttggcggtgtgccgatctgccgggcggg
cgcgccttgctcgaagggcagggcggtctggcggtcgtcggacgcctgaaagcggacgat
tggaatggtcggcgcagcgttcaattcgagattgaagacattgctgatccaagaatgctt
tga
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