KEGG   Brevundimonas vitisensis: JIP62_03235
Entry
JIP62_03235       CDS       T07812                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bvit  Brevundimonas vitisensis
Brite
KEGG Orthology (KO) [BR:bvit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bvit03400]
    JIP62_03235
Enzymes [BR:bvit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JIP62_03235
    5.6.2.6  RNA 3'-5' helicase
     JIP62_03235
DNA repair and recombination proteins [BR:bvit03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    JIP62_03235
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII Peripla_BP_4
Other DBs
NCBI-ProteinID: QQQ19147
LinkDB
Position
complement(644563..647106)
AA seq 847 aa
MPVRATGGVTALPPLFADWFASRGWSPRRHQLEMIAAAEAGSHALLVAPTGGGKTLAGFL
PSLIDLAERGPRPEHGPGSGVHTLYVSPLKALTTDVERNLMTPIREIGLNIHVESRTGDT
KQSKKQRQRDFPPDILLTTPEQLALFCAWEGARAWFADLKCVVIDEVHAIWSGKRGDLLN
LGLGRLQSFAPTLRRVALSATVDDPEMIASWLVPGPRVVTGDHANHGGGEAGVVIVRGDP
GAPPVIDVLVSEGRVPWAGHTGQHAMPEVYEAIRRSGMTLIFVNTRWQAEFVFQQLWAIN
EDDLPIALHHGSLATEQRRKVEAAMARGDIRAVVCTSTLDLGIDWGDVDLVIQLAAPKGA
SRLVQRIGRANHRLDEPSRALMVPASRFEMLECQAAREAVAANAFDWEPHHTGTLDTLAQ
HVMGVACSEGFDVGELHEEVTACAPYRDLPREVFEEVIDLVATGGYSLRTYDRFARIVRD
RQGRWRVRTAQMAQRHRMNVGTIVAAATLNVRVGSRRGGKLTVAGRKVGQAEEHYFEQMA
PGDTFVFAGQVWAYQGIVGIDVIVTAAQDKEPKIPSWGGSKFPMSTSLADRVRVLIQDRD
HWRVLPPDVQEWLELQEARSVIPQADALLVETFQRGSRHYLIAYPFEGGLAHNTLCMLLT
RRLDRLGVGPLGFVCTDYALAVWSIRPMEDLDLDALFQPDMLGDDLEAWLDESFVMKRTF
RNCALIAGLIERRQPGAEKTGRQVTFSTDLIYDVLRRHQPDHLLLRTARADAAKGFMDVA
RVGQLLTRIQGHIRHARLERASPFSVPVLVQIGRERVGGDAADMILEDSAEALIAEVMND
DAPEVAA
NT seq 2544 nt   +upstreamnt  +downstreamnt
atgccagttcgagcaaccggcggagtgactgcgctcccccctctcttcgccgactggttc
gcgtcgcgcggctggtcgccccggcggcatcagctggaaatgatcgcggcagcggaggcc
ggatcgcatgcactgctggtcgcgccgacgggtgggggcaagaccctggcggggttcttg
cccagtctgatcgatctggcggagcgtgggccgaggcctgagcatgggccggggtcgggg
gtgcataccctctatgtctcgccgctgaaggcgctgacgaccgatgtcgagcgcaacctg
atgacgccgatccgcgagatcgggctgaacatccatgtcgagagccggaccggcgacacc
aagcaatccaagaagcagcggcagagggactttccacccgacatcctgctgaccacaccg
gaacagctggcgctgttctgtgcctgggaaggcgcgcgggcctggttcgcggacctgaaa
tgcgtggtcatcgacgaggtgcatgcgatctggagcggcaagcgcggcgatctgctgaac
ctgggcctggggcggttgcagagtttcgcaccgaccctgcgccgggtggccctgtcggcg
acggtagatgatccggagatgatcgcgagctggctggtgccggggccaagggtggttacc
ggcgaccatgcgaaccatggtggaggcgaggcaggcgtcgtgatcgtccggggcgatccg
ggtgcgcccccagtcatcgatgttctggtcagcgagggccgcgttccttgggccgggcat
acgggccagcatgcgatgccggaggtctatgaggccatccggcgctcggggatgacgctg
atcttcgtcaatacccgctggcaggccgagttcgtgtttcagcagctgtgggccatcaac
gaggacgacctgccgatcgccctgcatcacgggtcgctggccaccgaacagaggcgcaag
gtcgaggcggccatggcgcgcggcgacattcgggcggtggtctgcacctcgaccctggac
ctgggcatcgactggggcgatgtcgatctggtgatccagctggctgcgcccaagggagcc
agccgtctggtgcagcggatcgggcgggccaaccacaggctggacgagcccagccgcgcc
ctgatggtgccggccagccggttcgagatgctggaatgccaagcggcgcgcgaggcggtg
gcggccaatgccttcgactgggagccgcatcacaccggcaccctggataccctggcccag
cacgtgatgggcgtggcctgttcggaaggcttcgacgtcggcgaactgcatgaggaggta
accgcctgcgccccttaccgcgacctgccgcgagaggtgttcgaggaggtgatcgatctg
gtggcgaccggcggctactcgctgcgaacctatgaccggttcgcgcggatcgtgcgggat
cgtcaggggcgctggcgggtccgcaccgcccagatggcccagcgccaccggatgaacgtc
ggcaccatcgtggcggcggcaacactgaacgtgcgggtgggatcgcggcgcggcggcaag
ctgacggtcgcgggccgcaaggtgggccaggccgaggagcattatttcgaacagatggcc
cccggcgacaccttcgtctttgccggtcaggtctgggcctatcagggcatcgtcggcatc
gacgtcatcgtgacggcggcccaggacaaggagcccaagatcccgtcctggggcggatcg
aagtttccaatgtcgacgtccctggccgatcgggtgcgggtgctgattcaggaccgcgat
cactggcgtgtcctgccgcccgatgtgcaggaatggctggaactgcaggaggcgcgatcg
gtgatcccgcaggctgacgccctgctggtcgagacgtttcagcgggggtcgcgacattat
ctgatcgcctatccgttcgagggcgggctggcgcacaacacgctctgcatgctgctgacg
cggcggctggaccggctgggggtcgggccgctgggctttgtctgcaccgactatgccctg
gctgtttggtcgatccggccgatggaggatctggacctggacgccctgttccagccggac
atgttgggtgacgatctggaggcctggctggatgagagcttcgtgatgaagcgcaccttc
cgcaattgcgccctgattgcgggcttgatcgagcggcgtcagcccggtgccgaaaagacc
gggcggcaagtcaccttttccaccgacctgatctatgacgtcctgcgccgccatcagccc
gatcatctgctgctgcgaacagcgcgggccgatgccgccaaggggttcatggatgtggcg
cgggtgggccagttgctgacccggatccagggccatatccgccacgcgcgcctggagcgg
gcctcgccgttctctgtgccggtcctggtccagatcgggcgtgagcgcgtgggcggggat
gcagccgacatgatcctggaagactcggcagaggccttgatcgccgaggtgatgaacgac
gacgcgcccgaggtggcggcatga

DBGET integrated database retrieval system