Brevundimonas vitisensis: JIP62_04430
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Entry
JIP62_04430 CDS
T07812
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bvit
Brevundimonas vitisensis
Pathway
bvit03420
Nucleotide excision repair
bvit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JIP62_04430
03430 Mismatch repair
JIP62_04430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvit03400
]
JIP62_04430
Enzymes [BR:
bvit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JIP62_04430
DNA repair and recombination proteins [BR:
bvit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JIP62_04430
MMR (mismatch excision repair)
Other MMR factors
JIP62_04430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF3553
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QQQ19355
LinkDB
All DBs
Position
887423..889765
Genome browser
AA seq
780 aa
AA seq
DB search
MNDFLPTPRLSDLARARPPGGEGGGDYLSGLNPEQRMAVETTEGPVLVLAGAGTGKTRVL
TTRLAHILATGKARPWELLVVTFTNKAAREMRERITHLIGPLAEGLRWLGTFHSVAASIL
RRHAELVGLKSSFTILDTDDQERLLKQLLEAANIDTKRWTPKSLAGLIDHWKNRGWTPDK
LPPSEDFANGKGQTLYAAYQSRLATLNACDFGDLLLHNLTILSKHADIAEEYRARFRYIL
VDEYQDTNVAQYLWLRLLTASTGNVCCVGDDDQSIYGWRGAEVDNILRFERDFPGARIIK
LERNYRSTSHILGAASGLIASNRDRLGKTLWTQDQSGEKVRVRGVWDGEAEARLIADEIE
TARKQGMNYKDMAILVRASFQMRAFEERLVMLAVPYVVIGGPRFFERAEIRDAHAYLRLI
QSEDDDLAFERIVNVPKRGIGDTSVQKILQIARQNGVSAMTAVRDLITSDELQARTRTAL
STFVRDLDRWRALAGDTPHWSVTETVLEESGYTDMQKADRVTGQTRLDNLKELVVAMQSF
ETLGAYLEHVSLVMDLDRGAGDDPDGAGAVQIMTLHGAKGLEFPLVFLPGWEEGVFPSQR
SIDEKGEKGLEEERRLAYVGVTRAKQDARISFAANRLVYGRWTTQLPSRFVDELPMDHVE
AQSDTGYYGATPGMKDAKSRWDDAPSFGAGYSSPGWQRAKAFTARQTPRSAHARHAVIEG
DGRLIATADPKSGAGWARGERVFHQKFGYGSIRTIEGNKLVVAFEKAGEKKVIDTFVEKA
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgatttcctgcctacgccccgcctgtccgacctggcccgcgcccgtccaccgggc
ggcgaaggcggcggcgactatctgtccgggctgaaccccgagcagcgcatggcggtcgag
acgaccgaggggcccgttctggtcctggccggggccggcacgggcaagacgcgggtgctg
acgacgcggctggcgcatatcctggcgaccggaaaggcacggccgtgggagttgctggtc
gtcaccttcaccaacaaggccgcgcgggaaatgcgagagcgcatcacccatctgatcggc
cccttagcagaagggctgcgctggctgggcaccttccacagcgtggcggcctcgatcctg
cggcgccatgcagaactggtcggcctgaagtccagcttcacgatcctggacaccgacgat
caggagcggctgctgaaacagctgctggaagcggccaatatcgacaccaagcgctggacg
cccaaatcgctggccgggctgatcgatcactggaagaaccgcggctggacgcccgacaaa
ctgcccccttccgaggatttcgcgaatggaaagggccagaccctttatgccgcctatcaa
tcccgtctcgcgacgctgaacgcctgcgacttcggcgatctgttgctgcacaacctgacc
attctgtcgaagcacgccgacatcgccgaggaataccgcgcgcggttccgttacatcctg
gtcgacgaatatcaggacaccaacgtcgcccagtatctgtggctgcggctgctgaccgcc
tcgaccggcaatgtctgctgcgtgggtgacgatgatcagtccatctatggctggcgcggg
gccgaggtcgacaacatcctgcggttcgagcgggactttcccggggcccgcatcatcaag
ctggaacgaaactatcgctcgaccagccacatcctgggggcggcatcgggcctgattgcg
tccaaccgcgatcgtttgggcaagaccctttggacccaggatcagtcgggtgaaaaagtt
cgcgtgcgcggcgtctgggacggcgaggccgaggcgcgcctgatcgccgacgaaatcgag
acggcccgcaaacagggtatgaactacaaggacatggccattctggtccgcgcctcgttc
cagatgcgggcgttcgaagagcggctggtcatgctggccgtaccctatgtcgtcatcggc
ggcccccgcttcttcgagcgggccgaaatccgcgatgcccatgcctatctgcggctgatc
cagtccgaagacgacgatctggcgtttgaacgcatcgtcaacgtccccaagcgcggcatc
ggcgacaccagcgtgcagaagatcctgcagattgcgcgccagaacggcgtctcggccatg
acggccgtccgcgacctgatcacctcggacgagcttcaggcccgcacgcgcaccgccctg
tccaccttcgtgcgcgatctggaccgctggcgcgccctggccggcgacacgcctcactgg
tcggtcaccgagaccgtgctggaagagagcggctataccgacatgcagaaggccgaccgc
gtcacgggtcagacccggctggacaacctgaaggaattggttgtggccatgcagtcgttc
gagactctgggggcctatctcgaacacgtatccctggtcatggacctggatcgcggggcc
ggtgacgacccggatggcgcgggtgcggtccagatcatgaccctgcacggggccaagggg
ctggagttcccgctggtcttcctgcccggctgggaggaaggcgtctttcccagccagcgc
agcatcgacgaaaagggcgaaaagggcctggaggaggaacgccgcctggcctacgtcggc
gtgacccgggccaagcaggacgcgcggatcagctttgccgccaaccggctggtctatggc
cgctggaccacccaactgcccagccgcttcgttgacgaactgccgatggaccacgtcgag
gcccagagcgacaccggctattacggcgcgaccccgggcatgaaggatgccaagtcccgc
tgggacgatgcccccagcttcggggcgggctattcgtcgccggggtggcagcgcgccaag
gccttcaccgctcgccagacgccgcgctctgcccacgcgcggcacgcggtgatcgagggc
gatgggcgtctgatcgccaccgccgacccgaagtccggcgcaggctgggccaggggcgag
cgcgtctttcaccagaagttcggctatggctccatccgcaccatcgaaggcaacaaactg
gtcgttgcgttcgaaaaggccggcgaaaagaaggtcatcgacaccttcgtggagaaggcg
tga
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