Brevundimonas vitisensis: JIP62_05290
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Entry
JIP62_05290 CDS
T07812
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bvit
Brevundimonas vitisensis
Pathway
bvit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JIP62_05290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvit03400
]
JIP62_05290
Enzymes [BR:
bvit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JIP62_05290
DNA repair and recombination proteins [BR:
bvit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JIP62_05290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QQQ19507
LinkDB
All DBs
Position
1068402..1069202
Genome browser
AA seq
266 aa
AA seq
DB search
MNASTIELAATEALLAFWRDAGVDACYADAPIDRTHIAPPPAAKAVARATATVTPLPLSG
AGLNDSVSEARRLATAADSLEALAKAVADFEGCPLRGMGARQSVFGRGDPAAPVLVIGEG
PGAEEDERGEPFVGKAGRLLDRMLAAAGLEGKVFITNTVFWQPPGNRTPSPAEQAVCAPF
VERTFALMQPRAVLLLGGAASKSVLQSDEGIMRLRGQWREWRLAEGNVSAPVMPTLHPAF
LLRQPQTKKQAWADLLALAVRLEQAD
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcatcaacgatcgaattggccgcgaccgaggccctgctggccttctggcgcgat
gcaggcgtcgacgcctgctatgccgacgcgccgattgatcgcacccacattgctccgcca
ccggccgccaaggcggtcgcccgggccaccgccacggtgacgcccctgccgctgagcggt
gctggcctcaacgattccgtgtcggaggcgcgccgcctggctacggcggccgacagtctg
gaggccctggccaaggccgtggcggatttcgaggggtgtccgctgcgtggcatgggagcc
cggcagtcggtcttcggtcgcggcgatccggcggcccctgtgctggtcatcggcgagggg
cccggggccgaagaggacgagcgcggcgaacccttcgtcggcaaggcggggcggctgctg
gaccgcatgctggcggcggcggggctggagggaaaggtcttcatcaccaataccgtcttc
tggcaaccgccgggcaatcgcacccccagcccggcggaacaggcggtctgtgcccccttc
gtggaacggacctttgcgctgatgcagcctcgggccgttctgctgctgggcggggcggcg
tcgaagtccgtgctgcagagcgacgagggcatcatgcgactgcgcgggcaatggcgcgag
tggcgtctggcggagggcaatgtctctgcacccgtgatgccgacgctgcatccggccttc
ctgctgcgccagcctcagaccaagaagcaggcctgggccgatctgctggcgttggcggtc
cggctggaacaggctgactga
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