Brevundimonas vitisensis: JIP62_05770
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Entry
JIP62_05770 CDS
T07812
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bvit
Brevundimonas vitisensis
Pathway
bvit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JIP62_05770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvit03019
]
JIP62_05770
Enzymes [BR:
bvit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JIP62_05770
Messenger RNA biogenesis [BR:
bvit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JIP62_05770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
AAA_22
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
QQQ19596
LinkDB
All DBs
Position
1161082..1162605
Genome browser
AA seq
507 aa
AA seq
DB search
MRVAARERTLRVSNKTFESMGLNKALLQALATEGYTTPTPIQAQAIPSVMTGKDLLGIAQ
TGTGKTAAFALPILHRLAENRTVPAPRTTRCLILSPTRELASQIADSFKAYGRHLGFKVA
VVFGGVKYGPQERALQNGLDVLVATPGRLLDHLQQKTLDLSSTEIFVLDEADQMLDLGFV
KPIRQIVSRIPAKRQNLFFSATMPTEIGKLAGELLKEPVKVQVTPQSTTVERIKQSVIWV
EQGRKRALLTELFSDPTFTRCLVFTKTKHGADKVAAYLEAGGVEAGAIHGNKSQSQRERA
LEAFKKGKLRVLVATDIAARGIDVDGVSHVVNFELPFVPEAYVHRIGRTARAGADGSAIS
FVAGDEMKLLRDIEKVTRQKIPAIDRRNDKALGLLDQSIMASGVASKATLPEREGRSGKE
GGRGGRRNPHRDGIRPEGGGQPHRQRKSAPGREARPAPERTYDPMAGERPRVTNNDPRKV
EAAKPEGQIARRRRRPSNGGKGFAAKA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtcgccgcacgcgaaagaacactccgagtgagcaacaagacattcgaatccatg
ggcctgaacaaggccctgctgcaggccctcgccaccgagggctatacgacccccaccccg
atccaggctcaggccatcccctcggtcatgaccggcaaggaccttctgggcatcgcccag
accggcaccggcaagacggcggccttcgccctgccgatcctgcaccgcctggccgagaac
cgcacggttccggccccgcgcaccacccgctgcctgatcctgtcgccgacgcgcgaactg
gccagccagatcgccgacagcttcaaggcctatggccgccacctgggcttcaaggtcgcg
gtggtgttcggcggcgtgaaatacggcccccaggaacgcgccctgcaaaacggactggat
gtgctggtcgccacccccggccgcctgctggaccatctgcagcagaagacgctggacctg
tcctcgaccgagatattcgtgctcgatgaggcggaccagatgctggacctgggcttcgtc
aagccgatccgccagatcgtcagccgcatcccggccaagcgccagaacctgttcttctcg
gccaccatgccgaccgagatcggcaagctggcgggcgaactgctgaaggagccggtcaag
gtccaggtcacgccgcagtcgaccacggtcgaacgcatcaaacagtcggtgatctgggtc
gaacagggccgcaagcgcgccctgctgaccgaactcttcagcgaccccaccttcacccgc
tgcctggtgttcaccaagaccaagcacggcgccgacaaggtcgcggcctatctggaggct
ggcggcgtcgaggccggggccattcacggcaacaagagccagtcccagcgcgagcgcgcc
ctggaagccttcaagaagggcaagctgcgcgttctggtcgccaccgatatcgcggcgcgc
ggcatcgacgtggacggcgtctcgcacgtcgtcaacttcgaactgcccttcgtgcccgag
gcctatgtccaccgcatcggccgcacggcgcgcgcgggggctgacggctcggccatcagc
tttgtcgccggcgacgagatgaagctgctgcgcgacatcgaaaaggtcacccgtcagaag
atcccggcgatcgaccgccgcaacgacaaggcccttggtctgctggatcagtcgatcatg
gcctctggcgtcgcgtccaaggccaccctgcccgagcgtgagggccggtctggaaaagag
ggcggacgcggcggacgccggaatccgcatcgcgacggcatccgtcccgagggcggcggc
cagccgcatcggcagcgcaagtcggcaccgggccgtgaggcgcgtccggcaccggagcgg
acctatgaccccatggccggcgaacgtcctcgcgtgaccaacaacgacccgcgcaaggtc
gaggccgccaagcccgagggccagatcgcccgccgccgccgccgtccctcgaacggcggc
aagggcttcgccgccaaggcctga
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