Brevundimonas vitisensis: JIP62_06535
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Entry
JIP62_06535 CDS
T07812
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bvit
Brevundimonas vitisensis
Pathway
bvit03030
DNA replication
bvit03430
Mismatch repair
bvit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JIP62_06535
03430 Mismatch repair
JIP62_06535
03440 Homologous recombination
JIP62_06535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvit03032
]
JIP62_06535
03400 DNA repair and recombination proteins [BR:
bvit03400
]
JIP62_06535
Enzymes [BR:
bvit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JIP62_06535
DNA replication proteins [BR:
bvit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JIP62_06535
DNA repair and recombination proteins [BR:
bvit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JIP62_06535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
AAA_16
AAA_30
RuvB_N
AAA_14
AAA_19
DUF815
AAA_18
TsaE
AAA_24
AAA_assoc_2
SRP54
Mg_chelatase
AAA_2
nSTAND3
AAA_33
ABC_tran
CbiA
RNA_helicase
Cdc6_lid
DUF685
Motif
Other DBs
NCBI-ProteinID:
QQQ19739
LinkDB
All DBs
Position
1286674..1288515
Genome browser
AA seq
613 aa
AA seq
DB search
MSDADPNLDGPPWEEDEPAEIFERDENTDDMFGAPAPAAPEPAAASAVVEAAPAAETDGA
AYTVLARKYRPRTFEDLIGQEAMVRTLTNAFASGRIAHAFMLTGVRGVGKTTTARLLARA
LNNETDTIDRPSLALTLDGRHDAAIMAGQHMDVMEMDAASHTGVGDIRDILESVRYAPVE
ARYKVYVLDEVHMLSTQAFNALLKTLEEPPPHAKFIFATTEIRKVPVTILSRCQRFDLRR
VEPEILVEHLSRIADREGMRVEADALALIARAAEGSVRDGLSLLDQALVQAEQGQTVQTT
VVRDMLGLADRSQTIALFERIMAGRTPEALEIFRTLYGYGADPVQVTNDLLEHCHAASVA
KMLGPNATRLPNDQAQALAALGAAISAGTLSRTWQMLLKALDEVRRAPNPADAVEMAIVR
LAYAADLPGPEEALKALQSGEMPGGGAGPRGSGGGGGGGGGGASAQAVARPMAAPARPDP
QTFEQMVALLGEKREIGLQIDVKSYIRPVSFKPGVLTYEPVAGAPVDLSRRLIARLNEWT
GRTWLIAANGQGGAATLMDQEKAARAAERARIEADPFVQSVLAAFPGAKIGEIKLPPRAP
ELPVIPDEPIEED
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccgacccgaatctcgacggccctccgtgggaggaagacgaacctgccgag
atcttcgagcgggatgagaacaccgacgacatgttcggcgcgcccgccccggcggcgccc
gagcctgccgccgcttccgccgtggtcgaggctgctcctgccgccgagaccgacggggcc
gcctatacggttctggcgcgcaaataccggccccggaccttcgaggatctgatcggccag
gaggcgatggttcgcaccctgaccaatgcctttgccagcggccggatcgcccatgccttc
atgctgaccggcgtgcggggggtgggcaagacgacgacggcgcgcctgctggcccgggcc
ctgaacaacgagaccgacaccatcgaccggccgtccctggccctgacgctggatggacgg
cacgacgcggccatcatggcgggccagcatatggacgtcatggagatggacgctgcctcc
cacaccggggtcggcgacatccgcgacatcctggaaagcgtccgctatgccccggtcgag
gcacgctacaaggtctatgtgctggacgaggtccacatgctctcgacgcaggcgttcaac
gccctgctgaagacgctggaagaacccccgccccacgccaaattcatctttgccaccacc
gagatccgcaaggtcccggtgacgatcctcagccgctgccagcggttcgacctgcgccgg
gtggagcccgagattctggtcgagcacctgtcgcgcatcgccgatcgcgaggggatgcgg
gtggaggccgacgccctggccctgatcgcgcgcgcagccgagggctcggtacgggacggg
ctgtcgctgctcgaccaggcgctggtgcaggccgagcagggccagaccgtccagaccact
gtggtccgcgacatgctgggcctggccgaccgcagccagaccatcgccctgttcgaacgc
atcatggccggccgcacgcccgaggcgctggaaatcttccgcaccctttatggctatggt
gccgatccggttcaggtgaccaacgacctcctggaacactgccacgccgcctcggtggcc
aagatgctggggcccaatgcgacccgcctgccgaacgatcaggcccaggccctggcggcg
ctgggggccgcgatctcggccgggaccctgtctcgcacctggcagatgctgctgaaggct
ctggacgaggtgcggcgcgcgcccaatccggccgatgccgtggaaatggcgattgtccgc
ctagcctatgccgccgacctgccgggcccggaggaggcgctgaaggcactccagtcgggc
gagatgcccggcggcggggccggaccgcgcggttcgggcggcggcggcggaggcggaggc
ggcggggcctcggcccaggctgtggcacggcccatggcggcccccgcgcggccagacccg
cagacctttgaacagatggtcgccctgctgggggaaaagcgcgagatcggcctgcagatc
gatgtgaaatcctatatccggccggtgtcgttcaagccgggcgtcctgacctatgagccg
gtggccggggcaccggtcgacctttcgcggcggctgatcgcacgactgaacgaatggacc
ggccgcacctggctgatcgccgccaacggtcagggcggggcggcgaccctgatggatcag
gaaaaggccgcccgcgcggctgagcgtgcgcgcatcgaggccgacccctttgtgcagtcc
gtgctggctgcctttcccggagccaagatcggcgagatcaaattgccgccccgcgccccg
gaactgcctgtaatcccggacgaaccgatcgaggaagactga
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