Brevundimonas vitisensis: JIP62_06875
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Entry
JIP62_06875 CDS
T07812
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
bvit
Brevundimonas vitisensis
Pathway
bvit00300
Lysine biosynthesis
bvit00470
D-Amino acid metabolism
bvit01100
Metabolic pathways
bvit01110
Biosynthesis of secondary metabolites
bvit01120
Microbial metabolism in diverse environments
bvit01230
Biosynthesis of amino acids
Module
bvit_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JIP62_06875 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JIP62_06875 (lysA)
Enzymes [BR:
bvit01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JIP62_06875 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QQQ19802
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All DBs
Position
complement(1361119..1362393)
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AA seq
424 aa
AA seq
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MNHFDVRDGALHAEAVSLEAIAEDVGTPVYVYSTATLERHYGLMRDAVAAHRPALGEALI
AFAVKANSNLSVLATLARMGCGADTVSEGEMRRALAAGVPADRIILSGVGKTDAELAFAI
KTGVRQINVESAVELERLIVVAAGLGVRADIAIRVNPNVGAGGHAKITTGGSGDKFGVPV
SEALDLYARAAASPHVRPVGLACHIGSQITTLDPLRSAFGVLRDMTLALRAQGMPVERLD
LGGGLGVPYHGMAATPAPTDYVAMAAEVLDGLGVEAAFEPGRLLAANAGLLLSRVIQVNE
RSDGRRFLVLDAAMNDLMRPALYDAFHEIEPVRTRPGDPVLHDVVGPVCETGDTFARDRS
LPPLQAGDLVVFRGAGAYGAVMAGEYNSRPLVPEVLVQQDRYAITRRRPSYEEMLSRELK
AYWL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatttcgacgttcgcgacggggccttgcacgctgaggccgtctcgctggaagcc
atagccgaagacgtcggcacgccggtctatgtgtattccaccgccacgctggagcggcac
tatggcctgatgcgtgatgctgtggccgcgcaccgtccggcgctgggtgaggcgttgatc
gcctttgcggtcaaggcgaacagcaatctgtcggtcctggccaccctggcccggatgggt
tgcggcgccgatactgtgtcggaaggcgagatgcgccgggccctggccgccggcgtgcct
gccgaccggatcatcctgtccggcgtgggcaagaccgatgccgaactggcctttgccatc
aagactggcgttcgccagatcaatgtcgaatcggccgtcgagctggagcggctgatcgtc
gtggcggcgggccttggcgtgcgcgcggacattgccatccgggtgaatccgaacgtcggc
gcgggtgggcatgccaagatcaccaccggcggatcgggcgacaagttcggcgttccggtg
agtgaggcgctggatctctatgcgcgcgccgcagcttcgcctcatgtccgtcctgtcggt
ctggcctgtcacatcggcagccagatcaccacgctggacccgctgcggtcggcctttggc
gtgttgcgcgacatgacgctggcgctgcgagcccagggaatgcccgtcgaacggctggac
cttgggggcggtctgggcgtgccctatcacggcatggccgctacccccgcgccgaccgac
tatgtcgccatggcagcagaggttctggacggcctgggtgtcgaggcggcctttgagccc
gggcgccttctggccgccaatgccggactgctgttgagccgtgtgatccaggtcaacgag
cggtcggacgggcggcggttcctggtgctggatgccgccatgaacgacctgatgcgtccg
gccctttatgacgccttccacgagatcgagccggtgcggacccggccaggcgaccccgtg
ctccatgacgtcgtggggccggtttgcgagacgggcgacacctttgcccgtgaccgctcc
ttgccgcccttgcaggccggagacctggtcgtgtttcgcggagccggggcctatggagcc
gtgatggccggcgagtacaacagccgccccctggtgcccgaggtgctggtccagcaggat
cgctatgccattacgcgccgccgtccgtcgtatgaggagatgctgtcgcgagagctcaag
gcctactggctctag
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