Brevundimonas vitisensis: JIP62_08010
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Entry
JIP62_08010 CDS
T07812
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bvit
Brevundimonas vitisensis
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvit03400
]
JIP62_08010 (addA)
Enzymes [BR:
bvit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JIP62_08010 (addA)
DNA repair and recombination proteins [BR:
bvit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JIP62_08010 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
Gmad1
AAA_16
AAA_12
DEAD
Motif
Other DBs
NCBI-ProteinID:
QQQ17309
LinkDB
All DBs
Position
1581158..1584661
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AA seq
1167 aa
AA seq
DB search
MTAPSPVEQARAHQVTAADPARSVFVTANAGSGKTTTLVDRVARLLLARVRPGEILCVTY
TKAAAAEMQARLFEKLGHWAVADNDTLSKSLAQLDNRDPKTFSDADLSEARRLFADALET
PGGLKIQTIHAFCEKLLRRFPLEAGVSPRFTVLEDAAATALSHGARESLAQAAFADPEGP
LGQAYAHFAVSLAWNNFNDLLGTLEARRDALADYVARVEAGEAPDPHTLVGVSPDDTAQA
IEADFLAWLNPADWSAAADGFATSSANDIKIATLMRATLPPQGSVEAMLPLFIDSKGIAR
ETFGTKKAPPAAADYLARVQLKYLAVLDRLRSLRVAEDTVRVLTLARAHAALYEAAKAAR
GALDFGDMVRHTVDLLTRHATAAWVLYKLDGGIEHVLIDEAQDTAPEQWAIFRALTEEFF
SGAGAGRRGTEPRISRTVFAVGDEKQSIYSFQGARPERLRQEAQLYDTLVRGAGAVFQQV
PLDTSFRSTEDVLAFVDATFAGPERSCALVGEVGDITVHQPARMGERGTVDLWPLFLDPE
IPAREAWNAPVDKESTASARKQLAQALARSIRREVESGIAIHDPKSREGARRPVGYGDYL
VLVRRRDATFEEIIRALKGEGVPVAGADRLKLNAHIVFDDLMALARFALYPGDDLSLAEV
LRSPLCDVSDFGDADSLYPLADKIDRDGRSLWRTLQARAGEHPAWTEARDLMQAAIGARD
RDPFAFFSGILNRVGADGRSGRARILARLGREAEEAIDETLAQVLAAEGRGGTDLETCLF
LLEAADVEVKREMEGARGEVRVMTVHGAKGLEAPIVILPDTTARAKPMGPTLMPVALDDD
SEAWLMCPGSKDDDCTRSAEVRQARVDRTDAESLRLLYVALTRARDRIIILGKGTKKQKQ
GFEEGSWWSVLTETFQRLGETQPGAIRDLGEGRLRYGVDPVVMAVRQDAATAAAVRVPDW
VRQRPAADPTARFLSPSQMDEAIRIAAPSPLAVAGGLGRFRRGDLIHRLLERLPDLPTAS
RHEAAVRMLSRERGLSDEQRAEMIAAAFGVLDDVRFAPVFGPGSRAEVAVTGSAPGLPPG
VTISGRMDRLVVTPDRVLVVDYKTNRPAPGRIEDADPAYVRQLAAYVAVLKRLYPGRAVE
AALVWTDGPDLMAVPPELMERALTPVR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaccgtcacccgtcgaacaggcgcgcgcccatcaggtcaccgccgccgatccc
gcccgctcggttttcgtcaccgccaatgccggatcgggcaagaccaccacactggtggac
cgggtggcgcgactgctgctggcccgggtgcgccccggcgagattctgtgcgtgacctat
accaaggccgccgccgccgagatgcaggcccgactgttcgaaaagctgggccactgggcg
gtggccgacaacgatacgctgagcaaatccctcgctcagttggacaaccgcgaccccaag
acgttctctgatgccgacctgtccgaggcccgtcgtctgttcgctgacgccctggaaacg
ccgggcggtctgaagatccagaccatccatgccttctgcgagaagctgctgcgccgcttt
cccctggaggcgggggtttcgccccgattcaccgtcctggaggacgcggccgccaccgcc
ctgtcccacggcgcacgcgagagtctggctcaggccgcctttgccgatcccgaggggccg
ctgggccaggcctatgctcattttgcggtcagcctggcgtggaacaatttcaacgacctg
cttggcaccctggaggcccgccgcgatgccctggccgactatgtcgcccgcgtcgaagcg
ggcgaggcccccgatccccataccctggtcggggtcagcccggatgataccgcccaagct
atagaagcggacttcctggcctggctgaacccggccgactggtccgccgccgccgacggc
ttcgcgaccagttccgccaacgacatcaagatcgccaccctgatgcgcgccaccctgccg
ccgcaggggtcggtcgaggcgatgctgccgctgttcatcgactccaagggcattgcgcgc
gagacgttcggcacaaagaaggccccgcccgctgccgccgactatctggcgcgggtccag
ttgaaatatctcgccgtcctggatcgtctgcggtcgctgcgcgtggccgaggacaccgtc
agggtcctgaccctggcccgcgcccatgccgccctgtacgaagcggccaaggcggcacgc
ggcgctctcgatttcggcgatatggtccgccacacggtcgatcttctgacccggcacgcg
accgccgcctgggttctgtacaagctggacggcggcatcgaacacgtcctgatcgacgag
gcccaggacaccgcgcccgagcaatgggcgatcttccgcgccctgaccgaggagttcttt
tccggggcgggggccggtcgccggggtaccgagccccgcatttcccgcacggtctttgcc
gttggtgacgagaagcagtcgatctattccttccagggagcccgcccggagcggctgcgt
caggaggctcagctctatgacaccctggtgcgtggggccggggccgtgttccagcaggtg
ccgctggacacctccttccgatcgacggaggacgtgctggcctttgtcgatgccaccttc
gccgggccagagcgcagctgcgccctggtcggagaagtgggcgacatcaccgtccaccag
cccgcccgcatgggcgagcgcggcaccgtggacctgtggcccctgttcctcgatcccgag
atcccggcgcgcgaggcgtggaacgcgcccgtcgacaaggaaagcaccgccagcgcgcgc
aaacagctggcccaggccttggcccgcagcatccggcgcgaggtcgagagcggcatcgcc
atccatgatccgaaatcgcgcgagggggcccggcgccccgtcggctatggcgactatctg
gtcctggtccgccgccgcgatgccaccttcgaagagatcatccgcgccctgaagggcgaa
ggcgtgcccgtggccggggccgaccggctgaagctgaacgcccatatcgtctttgacgat
ctgatggctctggcgcgctttgccctctatcccggtgacgatctcagcctggctgaggtg
ctgcgcagccccctgtgcgacgtctctgactttggtgacgctgacagcctctatcccctg
gccgacaagatcgaccgcgacggacgcagtctgtggcggacgcttcaggcccgcgcgggc
gagcaccccgcctggaccgaggcgcgcgacctgatgcaggccgccatcggtgcccgcgac
cgcgatccgtttgcctttttctccggcatcctgaaccgggtgggggccgatggccgctcg
ggccgggcacgcatcctggcccggctgggccgcgaggccgaagaagccatcgacgagacc
ctggcccaggtcttggcggccgaggggcgcggcggtaccgatctggaaacctgcctcttc
ctgctggaggccgccgacgtcgaggtgaagcgcgagatggagggtgcgcgcggcgaggtg
cgcgtcatgaccgtgcatggggccaaggggctggaggcccccatcgtcatcctgccggac
accaccgcgcgcgccaaaccgatgggcccgaccctgatgcccgtcgccctggacgatgac
agcgaagcctggctgatgtgccctgggtcaaaggacgacgactgcacccgctcggccgag
gtgcgtcaggcgcgggttgaccggacggacgcagaatctctgcgcctgctctatgtcgcg
ctgacgcgggcccgcgaccggatcatcatcctgggcaagggcaccaaaaagcagaagcaa
ggcttcgaggaaggcagttggtggtcggtcctgaccgaaaccttccagcgcctgggcgag
acgcagcccggtgccattcgcgatctgggcgaaggacggctgcgctatggggtcgatcct
gtggtcatggcggtgcggcaggacgcggcaacagcggccgcagtgcgtgtgccggattgg
gttcggcaacggccagccgccgaccccaccgcgcgtttcctgtctccgtcacagatggac
gaggcgatccgtatcgccgccccctcgcccctggccgtggcgggcggattgggccggttc
cggcgcggtgatctgatccaccgactgctggagcgtctgcccgatctgccgacggcgtcg
cggcacgaagcggctgtgcggatgctgtcgcgcgaacgcggcctatcggacgagcagcgc
gccgaaatgatcgcggccgcctttggcgtgctggatgatgtccgtttcgcccccgtcttc
gggcccggctcgcgggccgaggtggcggtcaccgggtcggcccccggcctgccgcccggc
gtcaccatatcgggccggatggaccggctggtcgtgacgcccgaccgggtcctggtcgtg
gattacaagaccaaccgaccggcaccgggccgcatcgaggacgcggaccctgcctacgtc
cgtcagttggccgcctatgtcgcggtcttgaaacggctctatccagggcgtgcggtcgag
gcggccctggtctggaccgacggcccggacctgatggcggtgccgcccgaactgatggag
cgcgccctgacgcccgtccgttga
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