Brevundimonas vitisensis: JIP62_08580
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Entry
JIP62_08580 CDS
T07812
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bvit
Brevundimonas vitisensis
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvit03016
]
JIP62_08580 (thpR)
Enzymes [BR:
bvit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
JIP62_08580 (thpR)
Transfer RNA biogenesis [BR:
bvit03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
JIP62_08580 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
STAS_2
Acb1
Motif
Other DBs
NCBI-ProteinID:
QQQ17414
LinkDB
All DBs
Position
1697350..1697889
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AA seq
179 aa
AA seq
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MIRLFTAIDMPDDVAETLARRQSGLPGARWRGREHLHLTLAFYGEIDERRADDLVAELER
AATGGPFAIELQGVGEFGDSHRSRSLWAGVAANERLGVLAGRCRSAGERAGVVMERRTYR
PHVTLAYLKPQADPDRIGAWMAGHNLLHSPPIRVDRFGLYSSVVTDDGGVYTLEREYLL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcttattcaccgccatcgatatgccggacgacgtggcagaaaccctggcgcgc
cggcagtccggcctgcccggcgcacgctggcggggacgcgagcacctgcatctgaccctg
gccttctacggcgagatcgacgaacggcgggcggacgatctggtggccgagctggagcgg
gcggcgacgggcggaccgttcgcgatcgagctgcaaggggtcggcgaattcggcgactcg
caccgcagccgctctctttgggccggggttgcagcaaacgagcggctgggtgtgctggcg
ggtcgctgccggtcggcaggggaacgggcgggggtggtgatggagcggcgcacctatcgg
ccccatgtcaccctggcctatctcaagccccaggcagacccggatcggatcggggcctgg
atggccgggcacaatctgctgcattcgccgccgatccgtgtcgatcggttcggcctgtat
tccagcgtcgtgaccgacgacggcggcgtctataccctggaacgggagtatctgctgtga
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