Brevundimonas vitisensis: JIP62_08800
Help
Entry
JIP62_08800 CDS
T07812
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bvit
Brevundimonas vitisensis
Pathway
bvit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JIP62_08800 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvit03019
]
JIP62_08800 (pnp)
03016 Transfer RNA biogenesis [BR:
bvit03016
]
JIP62_08800 (pnp)
Enzymes [BR:
bvit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JIP62_08800 (pnp)
Messenger RNA biogenesis [BR:
bvit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JIP62_08800 (pnp)
Transfer RNA biogenesis [BR:
bvit03016
]
Prokaryotic type
tRNA degradation factors
JIP62_08800 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QQQ17455
UniProt:
A0ABX7BJB1
LinkDB
All DBs
Position
complement(1740308..1742542)
Genome browser
AA seq
744 aa
AA seq
DB search
MFDIKRKTIEWAGRPLTLETGRIARQADGAVLATYGETVVLATVVYGRAPKPGLDFFPLT
VNYQEKTFAAGKIPGGYFKREGRPTEKETLVSRLIDRPIRPLFVKGFKNETQVVVTVLQH
DLENDPDVLAMVATSAALTISGVPFMGPIAAARVGYINNELVLNPTIDQLTESDLDLVVA
GTADALMMVESEAKELSEQTFLDALMFAHKGMQPVIDAIIELAEHAAKEPFDFQAEDHSD
VVTAIQNLVGEDIKAAYTHTAKHDRHNAVGAAKKKAAEALVKTDENPDGVEPAKFSTAFK
ECEAHVLRRDIIDNGHRVDGRALDKVRDIVSEVGIFPRTHGSALFTRGETQAIVVATLGT
GEDEQYIDALTGTYKEKFLLHYNFPPYSVGETGRMGGAGRREIGHGKLAWRAIRPMLPSN
EDFPYTIRLVSEITESNGSSSMATVCGSSLALMDAGVPLKKPVSGIAMGLILEPSGEFAI
LSDILGDEDHLGDMDFKVAGTRDGITSLQMDIKVAGITEEIMKKAIAQASAGRLHILDEM
DKAIDGARTELGEFAPKIESIKVPVDKIREVIGTGGKVIREIVEKTGAKINIEDDGTVKI
AASEQEKIDAAKTWIQSIVSEPEPGMIYSGKVVKVVDFGAFVNFFGAKDGLVHVSQIALE
RVANPADVLSEGQEVKVKFLGMDDRGKTKLSMKVVDQTTGEDLTDKINAERAERGEPPLA
EDTGGGGRPKRDGERGGDRGRSRR
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacatcaaacgcaagacgatcgaatgggccggacgcccgctgacactggagacg
ggccgcattgcccgccaggccgacggtgccgtgctggcgacctatggcgagaccgtggtc
ctggccactgtcgtttacggccgtgcgcccaagccgggtctggatttcttccccctgacc
gtcaactaccaagaaaagacctttgccgccggcaagatcccgggcggttacttcaagcgt
gaaggccgtccgaccgaaaaggaaaccctggtttcccgcctgatcgaccgcccgatccgc
cccctgttcgtcaagggcttcaagaacgagacccaggtggtcgtcaccgtgctgcagcac
gatctggagaacgaccccgacgtcctggccatggtcgccacctcggcggccctgacgatc
tcgggcgtgcccttcatgggcccgatcgcggccgcccgcgtcggctacatcaacaatgag
ctggtgctgaacccgaccatcgaccagttgaccgagtccgacctggatctggtcgtcgcc
ggcaccgccgacgccctgatgatggtggaatccgaagccaaggaactgtcggaacagacc
ttcctcgacgccctgatgttcgcccacaagggcatgcagccggtcatcgacgccatcatc
gaactggccgagcacgccgccaaggagccgttcgacttccaggccgaggaccactccgac
gtcgtcaccgcgatccagaacctggtcggcgaggacatcaaggccgcctacacccacacg
gccaagcatgaccgccacaacgccgtcggcgccgccaagaagaaggccgccgaagccctg
gtgaagaccgacgagaatccggacggcgtcgagccggccaagttctcgaccgccttcaag
gaatgcgaagcccacgtcctgcgtcgcgacatcatcgacaacggccaccgtgtcgatggc
cgcgctctggacaaggtccgcgacatcgtttcggaagtcggcatcttcccgcgcacccac
ggctcggccctgttcacccgcggcgaaacccaggcgatcgtcgtcgccaccctgggcacc
ggcgaggacgagcagtacatcgacgccctgaccgggacgtacaaagagaagttcctgctg
cactacaacttccctccctattcggtcggcgagaccggacggatgggcggtgctggtcgc
cgggaaatcggtcacggcaagctggcctggcgggcgatccgcccgatgctgccttcgaac
gaggacttcccctacacgatccgtctggtgtcggagatcaccgagtccaacggctcgtcc
tccatggccacggtctgcggttcgtcgctggcgctgatggatgcgggcgtgccgctgaag
aagcccgtgtcgggcatcgccatgggcctgatcctggagccgtcgggtgagttcgctatc
ctgtcggacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtcgccggc
acccgtgacggcatcaccagccttcagatggacatcaaggtcgccggtatcaccgaagag
atcatgaagaaggccatcgcccaggcgtcggccggtcgcctgcacatcctggacgagatg
gacaaggccatcgacggcgcccggaccgagctgggcgagttcgcgcccaagatcgagtcc
atcaaggttccggtcgacaagatccgcgaagtgatcggcaccggcggcaaggtgatccgc
gagatcgtcgaaaagaccggcgccaagatcaacatcgaggacgacggcacggtcaagatc
gccgcttcggagcaggaaaagatcgacgccgccaagacctggatccagtccatcgtgtcc
gagcccgagcccggcatgatctattccggcaaggtcgtgaaggtcgtcgacttcggcgcc
ttcgtgaacttcttcggggccaaggacggcttggtccacgtcagccagatcgctctggaa
cgcgtcgccaacccggccgacgtcctgagcgagggccaggaggtcaaggtcaagttcctg
ggcatggacgatcgcggcaagaccaagctgtcgatgaaggtcgtcgatcagaccacgggt
gaagacctgacggacaagatcaacgccgaacgggccgaacgcggcgagccgcctctggcc
gaggataccggtggcggtggccgtcccaagcgggacggcgagcgtggcggcgaccgtggt
cgcagccgtcgctga
DBGET
integrated database retrieval system
