Brevundimonas vitisensis: JIP62_09420
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Entry
JIP62_09420 CDS
T07812
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bvit
Brevundimonas vitisensis
Pathway
bvit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JIP62_09420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvit03400
]
JIP62_09420
Enzymes [BR:
bvit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JIP62_09420
DNA repair and recombination proteins [BR:
bvit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JIP62_09420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Helicase_C
ResIII
AAA_30
NRBF2
Zn_ribbon_PriA
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
QQQ17568
UniProt:
A0ABX7BL46
LinkDB
All DBs
Position
complement(1868261..1870423)
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AA seq
720 aa
AA seq
DB search
MIVATVLIPLPVPEAFDYEAPEGVVLARGDQVAVPLGPRTLRGIVTEVRETTGSNRRLKA
IEARLDDPPLPPGTLDFVEWAARWTLSPPGEMAAMALKGLRGPRPRPERRVRRVGERTPA
RPTPARLAVLAVLGERAMAAADLARAAAVSSGVVKGLIDEGVLEIIEIPAEAGLDAPDPD
HAPARLNADQAAAAAVMGEAVTTGGFHPFLLDGVTGSGKTEAYLEAAARALRADPGAQIL
ILLPEIALTQALIARLTDRFGAAPAEWHSGIAPPRRRLVWEAVVAGRCNIVVGARSALFL
PFTNLKLIVVDEEHDGSFKQEDGLVYHGRDLAVARARIEGATVVLASATPSLETLANAQA
GRYGWLRLEARHGAAVLPDITLLDLRQTPPDPQTWLSEPLRTAIAETLMAGEQTLLFLNR
RGYAPVVLCRACGHRMTAPDTDSWLVEHRYTGRLVCHLTGFSMPRPKHCPACGAEDTLVA
VGPGVERVEEEVKSLFPQARTAVFSSDTVPDARAARALIQAMADGEIDILVATQAAAKGH
NFPRLTLVGVVDADLGLRGGDLRAAERTFQLLTQATGRAGRADRPGRALLQTWTPEHPVL
IALAAGDRDAFVAAEMAEREAASLPPFGRLAALILSGENGEAVEKTAQALAASIPNAERL
EVYGPADAPLALVRGRRRKRLLVRADRDVDLQGFLRAWLARVKVPGSVRLTVDVDPYSFL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcgccaccgttctcattcccctgccggtgccggaggccttcgactatgaggcg
ccggagggggtggtgctggcgcggggggaccaggtggccgtgccgctggggccccggacc
ctgcgcggcatcgtcaccgaggtgcgcgagacgaccggatcgaaccggcggctgaaggcg
attgaggcgcggctggacgatccgcccctgccgcccggcactctggacttcgtcgaatgg
gccgcgcgctggaccctgagcccgcccggcgagatggcggccatggcgctgaagggcctg
cgagggccccgtccccggccggaacggcgcgtgcggcgggtcggcgaacgcaccccggcc
cggcctacccccgcgcggctggcggtgctggcggttctgggcgagcgggccatggcggcg
gccgacctggcgcgggccgccgccgtctcctccggagtggtcaaggggctgatcgacgag
ggggtgctggagattatcgagatcccggccgaggcgggtctcgatgcgcccgacccggac
catgccccggcccgcctgaacgccgaccaggcggcagcggcggcggtcatgggcgaggcg
gtcacgaccggcggctttcaccccttcctgctcgacggggtgaccggctcgggcaagacc
gaggcctatctggaggcggcggcgcgcgcgctgcgggccgatccgggggcgcagatcctg
atccttctgcccgagatcgccctgacccaggcgctgatcgcacgcctcaccgaccggttc
ggggccgcaccggcggaatggcattccggcattgccccgccgcgccgccggctggtgtgg
gaggcggtggttgcgggccgctgcaacatcgtggtcggggcacgctcggccctgttcctg
ccgttcaccaacctgaagctgatcgtggtcgacgaggagcacgacggctcgttcaaacag
gaggacggcctcgtctatcacgggcgggacctggccgtggcgcgggcccggatcgagggg
gccaccgtggtcctggcctcggccaccccgtcgctggagaccctggccaatgcccaggcc
gggcgatacggctggctgcggctggaggcccggcacggagcggcggtcctgcccgacatc
accctgctggacctgcgccagaccccgcccgatccccagacttggctgtccgagccgctg
cgcaccgcgatcgccgagaccctgatggccggggagcagaccctgctgttcctgaaccgg
cgcggctatgcccctgtggtgctgtgccgggcctgtggtcaccggatgacggcccccgat
accgacagctggctggtcgagcatcgctataccgggcggctggtctgtcacctgacgggc
ttttccatgccccggcccaagcattgcccggcctgcggggcggaggacaccctggtcgcg
gtcggccccggcgtcgagcgggtggaggaggaggtcaaaagcctgttcccccaggcccgc
accgcggtcttcagcagcgacaccgtccccgatgcccgcgccgcccgcgccctgatccag
gccatggcggacggagagatcgacatcctggtggcgacccaggcggcggccaaggggcac
aatttcccgcgcctgaccctggtcggggtggtggatgcggacctggggctgaggggcggg
gacctccgggcggcggagcggacctttcaactgttgacccaagcgaccgggcgggcaggg
cgggccgaccggccgggccgggccctgctgcagacctggacgcccgaacatccggtgttg
atcgccctggcggccggggatcgcgatgcctttgtcgccgccgaaatggcagagcgcgag
gcggcgtccctgccgcccttcgggcgtctggcggcgctgatcctgtcgggcgagaacggc
gaggcggtcgagaagacggcccaggccctggccgcctccattcccaatgccgaacggctg
gaggtctacggccccgccgacgcccccctggccctggtccgggggcggcggcgcaagcgg
ctgctggtccgggccgaccgcgacgtcgacctgcagggcttcctgcgcgcctggctggca
cgggtgaaggtgcccggctcggtgcggctgacggtcgatgtggatccgtacagctttctg
tag
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