Brevundimonas vitisensis: JIP62_09820
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Entry
JIP62_09820 CDS
T07812
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bvit
Brevundimonas vitisensis
Pathway
bvit03030
DNA replication
bvit03430
Mismatch repair
bvit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JIP62_09820
03430 Mismatch repair
JIP62_09820
03440 Homologous recombination
JIP62_09820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvit03032
]
JIP62_09820
03400 DNA repair and recombination proteins [BR:
bvit03400
]
JIP62_09820
Enzymes [BR:
bvit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JIP62_09820
DNA replication proteins [BR:
bvit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JIP62_09820
DNA repair and recombination proteins [BR:
bvit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JIP62_09820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QQQ17637
LinkDB
All DBs
Position
complement(1944188..1945240)
Genome browser
AA seq
350 aa
AA seq
DB search
MILAKRPEVDRFLKSPDAGIRAAVIHGKDRSGVAERADILCRAITPDLNDPFNVTVLTES
DIDGDEARLEEALTALSMIGGRRLVRIRLSSEKAAVDKLLAAALKVHADGGYNPDAMLVI
EAGALGRDSGLRKAAEASKGAAAIACYEDETGDVARMVREALEADKVGLTRDALDRFVSR
LPRERGLMRQEIERLALYVGPGSGRTIDVEELEAHLGVEPDASLQDAALQAFGGRPAPAQ
AGLRRALAEGESAVMAVRQAAIHLGKLRRINVLQASGAGAKEAAKAAGVFWKQEAEMLRQ
ARVWRLEALDQVQDSVNVADLATKTTGLPEHLIAERLLLEIAARARRLGI
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcgccaagaggcccgaggttgatcgctttctgaaaagcccggacgcgggcatc
cgcgcggcggtcattcatggcaaggatcggtcgggcgtcgccgaacgcgctgacatcctg
tgccgagccataacgcccgacctcaatgaccccttcaacgtcacggtcctgaccgaaagc
gacatcgacggcgacgaggcacgcctggaagaggccctgaccgctctcagcatgatcggt
gggcggcgtctggttcgcatccgtctgtcctccgagaaggcggcggtcgacaaattgctg
gccgccgccctgaaggtgcatgccgacgggggctacaatcccgacgccatgctggtgatc
gaggccggggccctgggccgcgactctggtctgaggaaggccgcggaggcatccaagggc
gctgccgccatcgcctgctacgaagacgagaccggcgacgtggcccggatggtgcgcgag
gctctggaggcggacaaggtcggactgacccgtgacgccctggaccgtttcgtgtcgcgc
ctgccgcgcgagcgggggctgatgcgccaggagatcgagcgtctggccctgtatgtcggt
cccggatcgggccgcaccatcgatgtggaggagttggaggcccatctgggcgtggagccg
gacgcctcattacaggacgccgcgcttcaggcctttggcggtcgcccggccccggcccag
gcgggcctcagacgcgccctggccgagggtgaatccgctgtcatggccgtgagacaagcg
gcgatccatctgggcaaacttcgccggatcaatgtgctgcaggcctccggggccggagcc
aaggaggcggccaaggctgccggtgtcttctggaaacaggaggcggagatgctgcgccag
gcccgtgtctggcggctcgaagcgctggatcaggtccaggacagcgtcaatgtcgcagac
ctggccacaaagaccaccggcctgcccgaacacctgatcgccgagcgcctcctgctcgaa
atcgccgcccgcgcccgccgcctggggatctag
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