Brevundimonas vitisensis: JIP62_09930
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Entry
JIP62_09930 CDS
T07812
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bvit
Brevundimonas vitisensis
Pathway
bvit03030
DNA replication
bvit03410
Base excision repair
bvit03420
Nucleotide excision repair
bvit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JIP62_09930 (polA)
03410 Base excision repair
JIP62_09930 (polA)
03420 Nucleotide excision repair
JIP62_09930 (polA)
03440 Homologous recombination
JIP62_09930 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvit03032
]
JIP62_09930 (polA)
03400 DNA repair and recombination proteins [BR:
bvit03400
]
JIP62_09930 (polA)
Enzymes [BR:
bvit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JIP62_09930 (polA)
DNA replication proteins [BR:
bvit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JIP62_09930 (polA)
DNA repair and recombination proteins [BR:
bvit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JIP62_09930 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JIP62_09930 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Taq-exonuc
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
QQQ17656
LinkDB
All DBs
Position
1961858..1964758
Genome browser
AA seq
966 aa
AA seq
DB search
MTDAEAQTTERALTQDGPPLRLWMIDASAYIFRAYHALPPLTRKSDGLPVGAVQGYCNML
WKLLRDMKGEDGPTHLVAIFDHSEKTFRNTLYDQYKAHRPPPPEDLVPQFALVREATAAF
GVHCVELPGYEADDLIATYACKARDAGGEAVIVSSDKDLMQLIGGGVVMWDPMKDRVLAE
DAVMEKFGVTPDKMVDLQALIGDSVDNVPGAPGIGPKTAAQLLDEYGDLDTLLARAGEIK
QPKRRQTLIDFADQIRLSRELVRLTCDAPAPEAIDDFAVRDPDPATLSAFLELMEFRSLA
RRVGDGKAPAKEGSAFAPKVMSAPVLTPRYAPTAPAVPVEAQPFDHEAYACIQTLEALDA
FLARATEAGVVGFDTETDALSATHAGLCGVSLAIGPNDACYIPLTHEHPPLAGAGGLDFG
DTPDTREPLTQLDKPTTLARLKTLLENPAVLKVTQNGKYDLAVMARRGIRVSPIEDTMLI
SYVLEGGLHGHGMDELSRLHLGHDPIPFKQVAGTGKAQKSFKHVELKPATAYAAEDADVT
LRLWQILKPRLAEEGLLNVYETLERGMPAVLADMELAGIRVDPNRLQSLSTEFGMRMAEL
EAQAHQIAGRPFNIGSPRQIGDILFGELDLPGGKKTASGQWETGAATLETLAPTHALPRV
LLDWRQLSKLKGTYTDALIQAADPATDRVHTSYQLAAATTGRLASSDPNLQNIPIRTETG
RQIRQAFIAAPGHVLISADYSQIELRLLAHIGDIPELKRAFKAGIDIHTATASEMFGVPV
DQMDPETRRRAKAINFGIVYGISAFGLANQLSIDQGEAGAYIKIYFERFPGIRAYMDATR
AEVRANGFVSTVFGRKIHIPAIHSKSGAERQFGERAAINAPIQGAAADIIRRAMIRMPGA
LTDAGLSTRMLLQVHDELVFEAPEAEADRAIAVIKRTMESAAEPAVALTVPLVVEARAAA
NWDEAH
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgccgaagcccaaaccaccgaacgcgccctgacccaggacgggccgcccctg
cgtctgtggatgatcgacgcttcggcctatatctttcgcgcctatcacgccctgccgccc
ctgacgcgcaagtcggacggcctgccggtcggcgcggtccagggttattgcaacatgctt
tggaagctgttgcgggacatgaagggcgaggacggcccgacccatctggtggccattttc
gaccattcggaaaagacgttccgcaacaccctgtacgaccagtacaaggcgcaccggccg
ccgccgccggaggatctggtgccgcagttcgccctggtgcgcgaggccacggcggctttc
ggcgtccattgcgtggagctgcccgggtatgaggccgacgacctgatcgccacctatgcc
tgcaaggcgcgcgacgcgggcggcgaggcggtgatcgtcagctccgacaaggacctgatg
cagctgatcggcggcggggtcgtcatgtgggatccgatgaaggacagggtcctggccgag
gacgccgtgatggaaaagttcggcgtgacgccggacaagatggtcgatctgcaggccctg
atcggcgacagcgtcgacaacgtccccggtgcccccggcatcgggcccaagaccgcggca
cagcttctggatgaatacggcgacctcgatacgctgctggcccgtgcaggcgagatcaaa
cagcccaagcgtcgccagacactgatcgactttgccgatcagatccggctgagccgcgag
ctggtccgcctgacctgcgatgcgcccgcgcccgaggccatcgacgatttcgccgtgcgc
gatcccgatccggcgaccctgtcggcctttctggagctgatggagttccgctccctggcg
cggcgggtcggcgacggcaaggcaccggccaaggagggctcggcctttgcgcccaaggtg
atgagcgcgccggtcctgacgccccgctatgcgcccacggccccggcggtcccggtcgag
gcccagccgttcgaccacgaggcctatgcctgtatccagacgctggaggcgctggacgcc
ttcctcgcgcgggcgaccgaggcgggggtggtcgggttcgacaccgagacggacgccctg
tcggccacccatgcggggctgtgcggggtgtcgctggccatcgggccgaacgatgcctgc
tatattccgctgacgcatgagcatccgccgctggcgggggcaggggggctggatttcggc
gacacgccggacacgcgcgagcccctgacccagctggacaagcccacaaccctggcgcgg
ctgaagaccctgctggagaatccggcggtcctgaaggtcacccagaacggcaagtacgac
ctggccgtcatggcccggcgcggcatccgcgtgtccccgatcgaggacaccatgctgatc
tcctatgtgctggagggcgggctgcacggtcacggcatggacgagctgagccgcctgcac
ctgggacacgatccgatcccgttcaaacaggtcgccggcacgggcaaggcgcagaaaagc
ttcaaacacgtcgagctgaaaccggccaccgcctatgccgccgaggacgccgacgtcacc
ctgcgcctgtggcagatcctgaaaccccggctggccgaggaaggcctgctgaacgtctat
gagacgctggagcggggcatgcccgccgtcctggccgacatggagctggccggtatccgc
gtcgatcccaaccggctgcagagcctgtcgaccgagttcgggatgcggatggccgagttg
gaggcccaggcccaccagatcgccggccgccccttcaacatcggcagcccccgccagatc
ggcgacatcctgttcggcgaactggacctgcccggcggcaagaagaccgccagcggccag
tgggagaccggcgccgccacgctggagaccctggcccccacacacgccctgccccgtgtc
ctgctggactggcgccagctgtccaagctgaagggcacctataccgacgccctgatccag
gccgccgaccccgcgaccgaccgcgtccacaccagctatcaactggccgccgccaccacc
ggccgcctggccagcagcgaccccaaccttcagaatatccccatacggaccgagaccggc
cgccagatccgccaggccttcatcgccgcccccggccatgtcctgatcagcgccgactat
tcccagatcgagctgcgccttctggcccacatcggcgacatccccgagctgaagcgcgcc
ttcaaggccggcatcgacatccacaccgccacggccagcgagatgttcggcgtccccgtc
gaccagatggaccccgagacccgccgccgcgccaaggcgatcaatttcggcatcgtctat
ggcatcagcgcctttggcctagccaaccagctgtcgatcgatcagggcgaggccggggcc
tatatcaagatttatttcgagcgcttccccggcatccgcgcctatatggacgccacccgg
gccgaggtgcgggccaacggcttcgtctcgaccgtcttcgggcgaaagatccacatcccc
gccatccattccaaatcgggagccgagcgccagttcggcgaacgcgccgccatcaatgcc
ccgatccagggtgccgccgccgacatcatccgccgcgccatgatccgcatgccgggcgcc
ctgacggacgccggcctctcaacccggatgctgctccaggtccacgacgaactggtcttc
gaggccccggaggccgaagccgaccgcgccatcgccgtgatcaaacggacgatggaaagc
gcggccgaacccgccgtggccctgaccgtgcccctggtggtggaggcgcgggcggcggcg
aactgggacgaggcgcattga
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