Brevundimonas vitisensis: JIP62_13160
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Entry
JIP62_13160 CDS
T07812
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bvit
Brevundimonas vitisensis
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvit03032
]
JIP62_13160
03400 DNA repair and recombination proteins [BR:
bvit03400
]
JIP62_13160
Enzymes [BR:
bvit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JIP62_13160
DNA replication proteins [BR:
bvit03032
]
Prokaryotic type
DNA Topoisomerases
JIP62_13160
DNA repair and recombination proteins [BR:
bvit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JIP62_13160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
PB1
Motif
Other DBs
NCBI-ProteinID:
QQQ18237
LinkDB
All DBs
Position
complement(2607773..2608798)
Genome browser
AA seq
341 aa
AA seq
DB search
MADGSARFDMASAAAVPHGLTWCSDEHAGLTRRRSGSGFSYRDARGQVLRDKVTLARIRA
LAIPPAWTDVWICPQATGHIQATGRDAKGRKQYRYHADWTTHASTSKFDRLPAFARALPR
LRERVEADLNRRGVCREKVLATAVRLLELTLIRVGNAQYAKQNRSYGLTTLHKRHLAATG
TAMTFAFKGKSGVEHEVKVRDRRLSTVVRQLRELPGQQLFKYRDDTGSLVSITSDDVNAY
IRDAMGGGFSAKDFRTWAGTVSAARALCEVEAPTSPTDAKRKITVCVKAVAGLLGNTPTV
CRSSYVHPTVFELFQAGQLGDVLPGPDTAGFEKALIRQLRA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggttctgctcgtttcgacatggcaagcgccgctgccgtcccccacggcctg
acctggtgcagtgacgaacatgccgggctgacccggcgccggtccggcagcggcttctcc
tatcgcgatgcgcgcggacaggtgcttcgcgacaaggtgaccctggcccggatccgggcc
ctggccattccgcccgcctggaccgatgtctggatttgccctcaggcgaccggacacatc
caggccaccggtcgcgacgccaaggggcgcaaacagtatcgctatcacgccgattggacg
acccacgcctcgaccagcaaattcgaccgccttccagcctttgcgcgcgccctgcctcga
ctgcgggaacgggtggaagcggacctgaaccgacgcggtgtctgtcgcgaaaaggtcctg
gccacggccgtacggcttttggaactgaccctgatccgggtcggcaacgctcagtatgcg
aagcagaaccgctcctatgggctgacgaccctgcacaagcgccatctggcggcgacgggc
acggccatgacctttgccttcaagggcaaaagcggggtcgagcatgaggtcaaggtgcgc
gaccggcgcctgtccaccgtcgtacggcagctgcgggaactgcctggacagcaattgttc
aagtaccgcgacgataccggctccctggtctcgatcacctccgatgatgtgaacgcctac
atccgcgacgccatgggcggcggcttttcggccaaggacttccgcacctgggcgggaacc
gtttcagcggcgcgggcgctgtgcgaggtcgaagcccccacctcgcccaccgatgcgaag
cgcaagattaccgtctgcgtgaaggcggtggcgggactgctgggaaacacaccgacggtc
tgtcgatcgtcctatgtccaccccacggtgttcgagttgttccaggccgggcagttgggc
gacgtcctgcccggacctgatacggcggggttcgaaaaggcgctgatacggcaactgcgc
gcctga
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