Brevundimonas vitisensis: JIP62_14755
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Entry
JIP62_14755 CDS
T07812
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bvit
Brevundimonas vitisensis
Pathway
bvit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JIP62_14755 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvit03400
]
JIP62_14755 (uvrA)
DNA repair and recombination proteins [BR:
bvit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JIP62_14755 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JIP62_14755 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
DnaJ_CXXCXGXG
AAA_21
BCA_ABC_TP_C
AAA_16
ATPase
nSTAND1
AAA_33
DUF4350
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QQQ18526
LinkDB
All DBs
Position
complement(2916713..2919616)
Genome browser
AA seq
967 aa
AA seq
DB search
MTEKHNFIRVRGAREHNLKGVDVDIPREKLVVMTGLSGSGKSSLAFDTIYAEGQRRYVES
LSAYARQFLELMGKPDVDLIEGLSPAISIEQKTTSKNPRSTVGTVTEIHDYMRLLWARVG
VPYSPTTGLLIESQTVSMMVDRLSALDDGERILLLAPVVRGRKGEYKKEIAEWQRSGFQR
LKIDGEFYAIEDAPTLDKKFKHDIDIVVDRIVTKAGLEPRYADSLQTALNLADGIAVAEW
ASAPEGEEPRRILFSEKFACPVSGFTISEIEPRLFSFNNPFGACPACDGLGVKLAFDADL
VVPDRDKSLHKGAVAPWSRGPSPLYTQTLQALSRHYGFSMDVPWRDLPAQAQSVILNGTK
TEKIKFVYDDNARKYEVSKAFEGVLPNLERRWRETDSAWVREELGRFQSETPCEACGGKR
LKPEALAVKVDGADIAEISWLSISKAYLWFTTLSERLTDKQLEIGRRILKEITDRLRFLN
NVGLDYLSMSRSSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNTRLLESL
RGLRDLGNSVLVVEHDEEAITTADYVIDMGPAAGVHGGTICAEGTPEEVMANPNSLTGKY
LTGEREIELPADGRRPIDRKKMLKISGATGNNLKNVTGEIPVGLFTCVTGVSGGGKSTFT
IETLYKAAARRLHNASDAPAPFDRIEGLEHFDKVIDIDQSPIGRTPRSNPATYTGAFGPI
RDWYAGLPESKARGYGPGRFSFNVKGGRCEACQGDGLIKIEMHFLPDVYVTCDVCKGKRY
NRETLEIVFKGKSISDVLDMTVEEAGHFFKAVPPIRDKMLTLSRVGLDYVKVGQSATTLS
GGEAQRVKLSKELSKRATGKTLYILDEPTTGLHFEDTRKLLEVLQELVDAGNTIVVIEHN
LDVIKVADYLLDFGPEGGDGGGEIVAKGTPEQVAADKASWTGRYLKEVLDRHETRRKARV
AALKKRA
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaagcacaacttcatccgcgtgcgcggggctcgcgagcacaatctcaagggt
gtcgacgtcgacattccgcgcgagaagctggtggtcatgaccggcctgtcaggctcgggg
aagtcctcactggcattcgacaccatctatgccgaaggccagcgccgctatgtcgagagc
ctgtcggcctatgcccgccagtttctggaactgatgggcaaacccgacgtcgatctgatc
gagggcctgtcaccggccatctccatcgaacagaagaccacgtccaagaatcctcggtcc
accgtcggcacggtcaccgagattcacgactatatgcgtctcctgtgggcgcgggtgggc
gtcccctattctccgacaaccggcttgctgatcgaaagccagaccgtatccatgatggtc
gaccggctgtcggcactggatgacggggagcggattcttctgctggccccggtcgtccgc
ggacgcaagggcgagtacaagaaggaaatcgccgagtggcagcgctcggggttccagcgg
ctcaagatcgacggcgaattctacgccatcgaagatgctccgacgctcgacaagaagttt
aagcacgacatcgacatcgtcgtggaccggatcgtcaccaaggccgggctggaaccgcgc
tatgccgacagtctccagaccgctctgaacctggccgacggcatcgccgtggcagaatgg
gcctcggcccccgagggcgaggagccgcgccggatcctgttctcggaaaagttcgcctgc
cccgtttccggcttcacgatcagcgagatcgagcctcgcctgttcagtttcaacaatccg
ttcggggcctgtccggcctgcgatggcttgggggtcaagctggccttcgacgccgatctg
gtcgtcccggaccgagacaagtctctgcataagggagccgtcgcgccgtggtcgcgcggc
ccctcgcccctctatacccagaccctgcaggcgctcagccgccactatggcttctcgatg
gacgtgccctggcgcgacctgccggcccaggcacagagcgtcatcctgaatgggaccaag
accgagaaaatcaaattcgtctatgacgacaacgccagaaagtacgaagtctcaaaggcg
ttcgaaggcgttctgcccaatctggaacgccgttggcgcgaaaccgacagcgcatgggtc
cgcgaggaactgggccggtttcaatccgaaacgccttgcgaggcgtgcggcggaaagcgg
ctgaagccggaagccctggcggtcaaggtcgacggggccgacatcgcagagatcagctgg
ctgtcgatttcaaaagcctatctgtggttcacgaccctgtcggagcggctgacagacaaa
cagcttgagatcgggcgccgcattctgaaggaaattaccgaccggctgcgtttcctgaac
aatgtgggcctggactatctcagcatgtcgcgatcgtcgggcacgttgtcgggcggcgag
agccaacgcatccggctggcctcgcagatcggctcgggcctgaccggcgtgctctatgtg
ctggacgaaccgtccatcggcctgcaccagcgcgacaacacccgtctgctggaaagcctg
cggggcctgcgcgacctgggcaactccgtcctggtggtcgagcacgacgaggaggcgatc
accaccgccgactatgtcatcgacatgggtccggccgccggggttcacggcggcaccatc
tgcgccgagggcacgcctgaagaggtcatggccaatcccaactcgctgaccggaaaatac
ctgaccggtgagcgcgagatcgagcttcccgccgacggtcgccgtccgatcgaccgcaag
aagatgctgaagatcagcggggccaccggcaacaatctgaaaaacgtgaccggcgagatc
cccgtcggcctgttcacctgcgtcaccggcgtgtccggtggcggcaaatcgaccttcacc
atcgagacgctttacaaggccgccgcacgccgcctgcacaatgcgtccgacgcccctgcc
cccttcgaccggatcgagggcctggagcatttcgacaaggtcatcgacatcgaccagagc
ccgatcggccgcactccgcgctcgaacccggcgacatataccggagcctttggccccatc
cgcgactggtatgcgggtttgccggaatccaaggcccgaggatacgggccgggccggttc
agcttcaacgtcaagggcggtcgctgcgaagcctgtcagggcgacggcctgatcaagatc
gagatgcattttctgcccgacgtctacgtcacctgcgacgtctgcaagggcaagcgatac
aaccgcgagacgctggagatcgtcttcaagggcaagtcgatcagcgacgtcctggacatg
acggtcgaggaggccggccacttcttcaaggccgtgccgccgatccgcgacaagatgctg
actctgtcacgggtgggcctcgactatgtgaaggttggccagtcagcgacgacgctttcg
ggcggagaggcccagcgggtgaagctgtcgaaagaactgtcgaagcgggcgaccggaaag
accctctacatcctggacgaaccgaccacgggtctgcatttcgaggacacgcgcaaactg
ctggaagtgctgcaggaactggtcgacgcgggcaacaccattgtggtgatcgagcacaat
ctggatgtcatcaaggtcgccgactacctgctggacttcggtccggagggcggcgacggc
ggcggcgagatcgtggccaagggcacgcccgaacaggtcgccgctgacaaggccagctgg
accggccgctatctgaaagaggttctggaccgccacgaaacgcgccgaaaggcccgcgtg
gcagcgctcaagaaacgcgcctga
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