Heyndrickxia vini: I5776_00030
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Entry
I5776_00030 CDS
T07201
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bvj
Heyndrickxia vini
Brite
KEGG Orthology (KO) [BR:
bvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvj03032
]
I5776_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
bvj03400
]
I5776_00030 (gyrB)
Enzymes [BR:
bvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
I5776_00030 (gyrB)
DNA replication proteins [BR:
bvj03032
]
Prokaryotic type
DNA Topoisomerases
I5776_00030 (gyrB)
DNA repair and recombination proteins [BR:
bvj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I5776_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QQZ11346
UniProt:
A0ABX7E6Z3
LinkDB
All DBs
Position
4392..6314
Genome browser
AA seq
640 aa
AA seq
DB search
MEQDQVQGQSYDENQIQVLEGLEAVRKRPGMYIGSTSSKGLHHLVWEIVDNSIDEALAGF
CDEINIVIESDNSIKVIDNGRGIPVGIHEKMGRPAVEVIHTVLHAGGKFGGGGYKVSGGL
HGVGASVVNALSSEFEVYVHRDGKIHYQKYERGVPCFDLKIIGETDHTGTTTHFKPDKEI
FTETTTYDYDILATRVRELAFLNRGIKLTIEDKREEPKKSEYHYEGGIKSYVEHLNRTKE
VIHDEPIYVEGEKDGISIEVSIQYNEGFTSSIYSFANNIHTYEGGTHEFGFKTALTRVIN
DYARKNGLIKESDSNLSGEDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEARTITDAVFS
EHFDKFMLENPTVAKKIVEKGLMAARARLAAKKARELTRRKSALEVSSLPGKLADCSSRD
PKISELFIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILTNNEIRTIITAL
GTGISEDFDISKARYHKIVIMTDADVDGAHIRTLLLTFFYRYMRQTIEAGYIYIAQPPLY
KIAQGKRVEYVYSDKELEQALSQMPQQPKPGIQRYKGLGEMNPEQLWETTMDPERRTLLQ
VSLEDAIEADETFEMLMGDKVEPRRNFIEENAIYVKNLDI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagatcaagtacaaggtcaaagctatgacgaaaatcagatacaggttcttgaa
ggactggaagctgttcggaagcgtccaggaatgtatattggatccacaagcagcaaaggg
ctacatcatcttgtttgggaaattgtagacaatagtattgatgaagcacttgcaggattt
tgtgatgaaataaatattgtgattgaaagtgataacagtattaaagtaatagataatgga
cgtgggattcctgtaggaattcatgaaaaaatgggaagacctgcggttgaagttatccat
acagttctccatgccggagggaaatttggcggaggaggatataaagtttctggtggatta
catggtgttggtgcttctgtagtaaatgcattatcaagcgagtttgaggtatatgtacat
cgagacggcaaaatccattaccaaaaatatgagcggggagtaccgtgctttgatttaaaa
attattggtgaaacggatcatactggaacaactactcactttaaaccagataaagaaatt
tttacagagactactacttatgattatgatattttagcaacgcgtgttcgagaactcgct
tttttaaatcgtggaattaaacttaccattgaggataaaagagaagaaccgaaaaaaagt
gaatatcactatgaaggtggtattaagtcttatgttgaacacttaaaccgaacgaaagaa
gttatccatgatgagccaatctatgtagaaggcgaaaaggatggaatttcgattgaggtt
tcaattcaatacaatgaaggatttacaagcagcatttattcttttgccaataatattcat
acgtatgaaggtggtacccatgaatttggctttaagacagccttaacaagggttattaat
gattatgctcgtaaaaatggcctcattaaggaaagtgattctaatttatcaggtgaggac
gttcgagaagggttaacagcaatcgtttcaatcaagcatccagatccgcagtttgaaggg
caaacgaaaacaaaattaggcaattctgaagctagaacaattaccgatgctgttttctct
gagcattttgataaatttatgctggaaaacccaacagttgcaaaaaaaattgttgaaaag
ggcttaatggcagcacgtgcgcgtttagcagcaaaaaaggctagagagcttactcgccgg
aaaagtgcattggaagtttcaagccttcccgggaaattagcggattgctcatctcgcgat
ccgaaaatcagcgaattatttatcgttgagggtgattctgccggtggctctgcaaaacaa
ggtagggatagacattttcaagcaattttacctttaaggggaaaaatccttaatgttgaa
aaggcacgattagataaaatcctgactaataatgaaattcgaacaattattactgcatta
ggtacaggtataagtgaggattttgacatttcaaaggcacgctatcataaaatagttatc
atgactgatgccgatgtagatggtgcgcatattcgaacattgttattaaccttcttctat
cgctatatgagacaaacaatagaggccggatacatttatattgcacagccgcctctttat
aaaatagctcaaggcaaacgagtcgaatatgtatatagtgacaaggaattggaacaagca
ttaagtcaaatgccacagcaaccaaaacccggaattcaacgatataaaggtcttggtgaa
atgaatcctgaacaattatgggaaacaacgatggatccagagcgtagaactttacttcag
gtaagtcttgaagatgcaatagaagcggatgaaacatttgaaatgctaatgggagataaa
gttgaaccaagacgtaattttatcgaggaaaatgcaatttatgtaaagaacttagatatt
taa
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