Heyndrickxia vini: I5776_00810
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Entry
I5776_00810 CDS
T07201
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bvj
Heyndrickxia vini
Pathway
bvj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bvj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I5776_00810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvj03021
]
I5776_00810
03400 DNA repair and recombination proteins [BR:
bvj03400
]
I5776_00810
Enzymes [BR:
bvj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I5776_00810
Transcription machinery [BR:
bvj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I5776_00810
DNA repair and recombination proteins [BR:
bvj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I5776_00810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
PASTA
Motif
Other DBs
NCBI-ProteinID:
QQZ09575
LinkDB
All DBs
Position
143625..144569
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEVNDDASFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VMHEFSTIEGVVEDVTSIILNIKKLALKIYSDEEKTLEIDVQGEGVVTAADITHDSDVEI
LNPDLYIATLGKNAHFRMRMSAVTGRGYTPAEQNKREDLPIGVIPIDSIYTPVQRVNYQV
ENTRVGQVSNFDKLSLDVWTDGSIGPKEAISLGAKILTEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
AKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatcgaaaagccaaaaattgaaacggttgaggttaacgatgatgcaagtttc
gggaagttcgtcgtagaaccactagagcgtggatatggtacaactttgggtaactcctta
cgtcgtatcctattatcctcacttccaggtgcagctgtcacttctatacaaatagatggg
gtcatgcatgagttctcaacaattgaaggcgtcgtagaagatgtaacatcaattattctt
aatattaaaaagctagcattgaaaatctactctgacgaagaaaaaacgttagaaattgat
gtgcaaggagaaggagttgtcactgctgctgacatcacacatgacagcgacgtggaaatt
cttaatccagatctttacatcgcaacattagggaaaaatgctcacttccgtatgcgtatg
tcagctgtaacaggtcgtggttatacacctgctgaacagaataaacgtgaagatcttccg
attggagtaattccaattgattctatctatacaccggttcaacgtgtaaactatcaagtg
gaaaatacccgtgttggtcaagtatcaaactttgataagttatcattagatgtgtggact
gatggaagcattggaccaaaggaagcaatttctctaggtgcaaagattcttacagagcac
ttaaatattttcgtaggtttaaccgatgaagcacaaaatgctgaaatcatggttgaaaaa
gaagaagatcagaaggaaaaggttcttgaaatgacgattgaagaacttgatctctccgtt
cgttcttataattgcctaaaacgtgccggaatcaacactgttcaggagttagcaaataaa
actgaagaagatatgatgaaagttcgtaatttaggtcgtaagtctttagaagaagtaaaa
gcgaagttagaagaacttggtttaggcttaagaaaagacgattga
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