KEGG   Heyndrickxia vini: I5776_00810
Entry
I5776_00810       CDS       T07201                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bvj  Heyndrickxia vini
Pathway
bvj03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bvj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    I5776_00810
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bvj03021]
    I5776_00810
   03400 DNA repair and recombination proteins [BR:bvj03400]
    I5776_00810
Enzymes [BR:bvj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     I5776_00810
Transcription machinery [BR:bvj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     I5776_00810
DNA repair and recombination proteins [BR:bvj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      I5776_00810
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 SAM_EPH PASTA
Other DBs
NCBI-ProteinID: QQZ09575
LinkDB
Position
143625..144569
AA seq 314 aa
MIEIEKPKIETVEVNDDASFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VMHEFSTIEGVVEDVTSIILNIKKLALKIYSDEEKTLEIDVQGEGVVTAADITHDSDVEI
LNPDLYIATLGKNAHFRMRMSAVTGRGYTPAEQNKREDLPIGVIPIDSIYTPVQRVNYQV
ENTRVGQVSNFDKLSLDVWTDGSIGPKEAISLGAKILTEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
AKLEELGLGLRKDD
NT seq 945 nt   +upstreamnt  +downstreamnt
atgattgaaatcgaaaagccaaaaattgaaacggttgaggttaacgatgatgcaagtttc
gggaagttcgtcgtagaaccactagagcgtggatatggtacaactttgggtaactcctta
cgtcgtatcctattatcctcacttccaggtgcagctgtcacttctatacaaatagatggg
gtcatgcatgagttctcaacaattgaaggcgtcgtagaagatgtaacatcaattattctt
aatattaaaaagctagcattgaaaatctactctgacgaagaaaaaacgttagaaattgat
gtgcaaggagaaggagttgtcactgctgctgacatcacacatgacagcgacgtggaaatt
cttaatccagatctttacatcgcaacattagggaaaaatgctcacttccgtatgcgtatg
tcagctgtaacaggtcgtggttatacacctgctgaacagaataaacgtgaagatcttccg
attggagtaattccaattgattctatctatacaccggttcaacgtgtaaactatcaagtg
gaaaatacccgtgttggtcaagtatcaaactttgataagttatcattagatgtgtggact
gatggaagcattggaccaaaggaagcaatttctctaggtgcaaagattcttacagagcac
ttaaatattttcgtaggtttaaccgatgaagcacaaaatgctgaaatcatggttgaaaaa
gaagaagatcagaaggaaaaggttcttgaaatgacgattgaagaacttgatctctccgtt
cgttcttataattgcctaaaacgtgccggaatcaacactgttcaggagttagcaaataaa
actgaagaagatatgatgaaagttcgtaatttaggtcgtaagtctttagaagaagtaaaa
gcgaagttagaagaacttggtttaggcttaagaaaagacgattga

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