Heyndrickxia vini: I5776_05355
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Entry
I5776_05355 CDS
T07201
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bvj
Heyndrickxia vini
Pathway
bvj02020
Two-component system
bvj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bvj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I5776_05355 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I5776_05355 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvj03021
]
I5776_05355 (rpoN)
Transcription machinery [BR:
bvj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I5776_05355 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MptE-like
HTH_3
Xre-like-HTH
Sigma70_r4
HTH_IclR
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
QQZ10372
UniProt:
A0ABX7E7T8
LinkDB
All DBs
Position
1090064..1091404
Genome browser
AA seq
446 aa
AA seq
DB search
MDLKFGLYQQQTLKLSMTQELKQAIELLQYSAQELTSFLEAKATENPLIQLENTNIKYID
MRNDGSKKSRSKIKERDDKQWIDQIAQTSMSLQDYLFIQISLKTLSKDEKRMLTQLIYNL
DSNGYLTIRLDEAAQICGLPTEMADQSLRLIHNLEPAGVGARDLRECLLLQINRKKECPQ
IVKDILLNYFNDFAEKKWKVISNGLNVEMNEIQLAADYIKKLEPRPGSAYHKEQPQYIVP
DLIVTIENENIEVNLFQKHLPNVQFQKDYYATMSAYKDQQVKHFLKEKTKDYQWIMKSLQ
QRNETLLNVGMTIIEKQFDFFLKGPAYLKPLTMKEVSHEIGIHESTVSRAVREKYIQTPF
GTYELRYFFSAGLMKTSGEEEEQASAFQVKTMIANFIDKENKLKPLSDQLIVDELKKLGI
VVSRRTIAKYREQLKIPSSAKRKRYG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ttggatctaaaatttggattataccaacaacaaacattaaaactgtcaatgacccaagaa
ttaaagcaggcaatcgaacttctccaatattctgcacaagaattaacctcttttttggaa
gcaaaagcaactgaaaatcctcttatacaattagaaaatacaaatattaaatatatagat
atgcgtaatgatggatcgaaaaaaagcagatccaaaattaaggagcgggatgataaacaa
tggatagatcaaatagcccaaacatcaatgagcctacaagattatctattcattcaaatt
tctttgaaaacgctgtcaaaagatgagaaaagaatgctcactcagcttatatataatctt
gattcaaatgggtatttgacgatcaggcttgatgaggctgcgcagatttgcggtctccca
accgaaatggctgatcaaagccttagattaattcataatttagaaccggcaggagtaggt
gcgcgtgatcttagggagtgtttattgctccaaatcaatcgaaaaaaagagtgtccacaa
attgtaaaggatattctattaaactattttaatgactttgcggagaaaaagtggaaagta
atctcaaatggtcttaacgtcgaaatgaatgaaattcaacttgctgcagattatattaaa
aaacttgaaccacggcccggatcagcttatcataaagaacagcctcaatacattgtaccg
gatttaattgtgacgatagaaaatgaaaatattgaggttaatctttttcaaaaacatttg
ccaaatgtgcaattccaaaaggattattatgcgacgatgtctgcatataaggatcaacaa
gttaaacactttttgaaagagaaaacgaaagattatcagtggatcatgaaaagtcttcaa
cagagaaatgaaacccttttaaatgtaggaatgacgataattgagaagcagtttgatttc
tttttaaaaggaccggcgtatttaaaaccgttaacgatgaaagaagtatcccatgaaatt
ggtatacatgaatctactgtaagtcgtgcagttcgagaaaaatatattcaaacgccgttt
gggacatatgaattaaggtactttttttctgcaggtttaatgaaaacatcgggtgaagaa
gaagagcaagcatccgcctttcaagtaaaaacaatgatcgcaaatttcattgataaagaa
aataaattaaaaccactttctgatcagttaattgttgatgaattaaagaaactgggaatc
gttgtttcaaggcgaaccattgcaaaatatcgcgaacaattaaagattccttcttcagca
aagcggaaacggtatggataa
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