Heyndrickxia vini: I5776_06910
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Entry
I5776_06910 CDS
T07201
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bvj
Heyndrickxia vini
Pathway
bvj03030
DNA replication
bvj03430
Mismatch repair
bvj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I5776_06910 (dnaE)
03430 Mismatch repair
I5776_06910 (dnaE)
03440 Homologous recombination
I5776_06910 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvj03032
]
I5776_06910 (dnaE)
03400 DNA repair and recombination proteins [BR:
bvj03400
]
I5776_06910 (dnaE)
Enzymes [BR:
bvj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I5776_06910 (dnaE)
DNA replication proteins [BR:
bvj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I5776_06910 (dnaE)
DNA repair and recombination proteins [BR:
bvj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I5776_06910 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QQZ10623
LinkDB
All DBs
Position
1386557..1389907
Genome browser
AA seq
1116 aa
AA seq
DB search
MSFVHLQVTTAYSLLSSTISIQKLVEKAKELQYQTLAITDRNVLYGVVPFYKECIKNQIK
PIIGLTIDVISEMDKETSYPLVLLAKNTTGYNNLLKLSSTIQTKSPNGIPLKWLKGYHEG
LFGFTPGITGEIEQYLLRGEFEKAEKVASIFQSIFEKDSFYLSLQNHQLADEKIIREKFV
QLSKKCNIKLIVTNDVQYLEKSDSFSHECLLAINENKKLSDDDRKTLPSEEYDLKDKKSM
VEAFSEYIDALENTVLVANSCQLQIEMGRKLLPKFPLPIGETSDKVLKEYCEKGLRERFD
HPEQIYWERLSYELSIINQMKFSDYFLIVSDFMKFARTQGILTGPGRGSAAGSLVAYVLK
ITNVDPIEHELLFERFLNPERITMPDIDIDFPDHRRDEVIQYVTEKYGQLHVAQIITFGT
FAAKAAARDVARVFGFNSKELEQLSRMIPSKLGITLKQAFKESKKLQEFVDESEIHQKLF
QTALKIEGIPRHVSTHAAGVVISEEPLVNLIPIQDGHTGSYLTQYPMDILEEIGLLKMDF
LGLRNLSLIERIVTSIQKGTGTKINIDQIPLDDEKTYQLLSEGNTTGVFQLESEGMRSVL
KRLKPTDFEDIVAVNALYRPGPMENIPQYIDRKHGKEVIKHPHQDLESILKKTYGVIIYQ
EQIMQIASRMAGFSLGEADLLRRAVSKKKKDVLDQERIHFVNGATENGYSEKTANEIYDL
IVRFANYGFNRSHAVAYSFIAYQLAYLKAHFPLYFMASLLTSAVGNADKIAQYIREANQM
NIQVLPPSINKSHYFFKVEKNAILFSLAAIKGLGGVALKDILNARASKSFSDLFDFCIRT
SHLSINRKTIENLVFSGAFDEFQVDRATLLASIDVALQHAELVNPSDNMEDLFSDDEFFQ
IKPKYVEVEPISIIDKLSFEKQVLGLYLSDHPIRPFQKLINDYTNDTILSISNNQKHVKL
GVYLNEVKTIRTKKGEQMCFVKISDSSGEMEGVLFPKSYRQYSGLCRQGQVTLLEGTVEV
RNDSKQLIIQKMTDMKDIEEANKKLYLRIPYLFQSHESLIRIKEIIQSHHGGIPVILFYE
HTQTTIQLPRVNWVQPSEQCIDELIRLLGEQNVILQ
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatttgtccatttacaagtaacaaccgcatatagcttattatctagcaccatctca
attcaaaaactagttgaaaaagctaaagagcttcaatatcaaacattggccattaccgat
cggaatgtgctgtacggagtggttccgttttataaagaatgtataaaaaatcagataaag
cctattatcggattaacaatagatgttatcagtgaaatggataaagaaacgtcctatcca
ctcgtcctattagctaaaaatacaacgggatacaataatttattaaagctttcaagtacg
atccaaacaaaatcaccaaatggtattccgttaaaatggttaaaaggataccatgaaggc
ttgtttggctttacacctgggataactggtgaaattgaacagtatttactgcggggagaa
ttcgaaaaggcggaaaaagtggcatctattttccaaagtatttttgaaaaggattcattc
tatctttctttgcaaaatcatcaacttgctgatgaaaaaataataagagaaaaattcgtt
caactttcaaaaaaatgtaatataaaacttatcgttacgaatgatgtgcaatatttggaa
aaaagtgatagctttagccacgaatgtttacttgctatcaatgaaaataagaaacttagt
gatgatgatcgaaaaacacttccatccgaagagtacgatttgaaagataaaaagagcatg
gtggaagctttctctgaatatatcgacgcattagaaaatacagtacttgtagcaaattcg
tgtcaattacaaattgaaatggggagaaaacttctaccgaaatttcccttgcctattggg
gaaacctctgacaaagttttaaaggaatactgtgaaaaagggttgcgggaaagatttgat
catccggaacagatttattgggaacgtttatcttatgaattatcaataattaatcaaatg
aaatttagtgattatttccttatagtttcggattttatgaaatttgcacgaacccaagga
atattaactggacctggtcgaggttcagcagcgggctctcttgtcgcctatgtattaaaa
attacgaatgtcgacccaattgaacatgaattgctttttgaacgatttttaaatccagag
agaataacgatgcctgatattgatattgattttccggatcatcgtcgggatgaagtcatt
caatatgttactgaaaaatacggacagttacatgtagcacaaattattacgtttggaaca
tttgccgcaaaagctgcggcaagagatgttgctagggtatttggctttaattcaaaggaa
ttagagcaattgtcaaggatgattccaagtaaactaggtataacattaaaacaagcattt
aaggaatcaaagaagcttcaggaatttgttgatgaatctgaaatacatcaaaaacttttt
cagacagcattaaaaattgaaggaattccacgacatgtttcaacacacgcggcgggtgtc
gtcattagtgaggaaccgctagttaaccttatccccatccaggatggacatacaggcagt
tatttaacacaatatccaatggacatcttggaagaaataggcctattaaaaatggatttt
ctaggtcttcgaaatttatcgttaattgaacgtatagtgacgagtattcaaaaaggtacg
ggaacaaaaataaatattgatcaaattcctttagatgatgaaaaaacctatcagttgtta
agtgaaggaaacactaccggtgtattccaattagaatcagaaggtatgcgcagtgtacta
aaaaggttaaaaccgacagattttgaggatattgttgcagtaaatgcactttaccgtccc
ggtccaatggaaaatattccacaatacattgatcgaaaacatgggaaagaagtgatcaaa
catccacatcaagatttagaatcaattctaaagaaaacctatggcgttatcatttaccag
gaacaaattatgcaaattgcctcacgaatggctgggttttcgttaggtgaagcggattta
cttcgaagggctgttagtaaaaagaaaaaggatgtattagatcaggaaaggattcatttt
gttaatggagcgactgaaaatggatatagcgagaaaacggccaatgaaatatatgattta
attgttcgatttgctaattatggatttaaccgaagccatgctgttgcttatagctttatc
gcctaccaactcgcatatttaaaagctcacttcccattatattttatggcttctttacta
acttctgctgttggaaatgcggataagattgcacaatatatacgagaagcgaatcagatg
aacattcaagtgcttccgccatctattaataaaagtcattacttttttaaggtcgaaaaa
aacgccattctctttagcttagcagcgataaaaggattaggtggtgtagcattaaaagat
attttaaatgcaagagcatccaagtcttttagtgatctattcgatttttgcattcgaacg
tcacatctgtctattaatcggaaaacgattgaaaatctagtgttttcaggagcgtttgat
gagtttcaggttgatcgtgcaacacttttggcaagtattgacgtagcattgcaacatgct
gaacttgtcaatcctagcgataatatggaagatttattctctgatgatgaattttttcaa
attaaaccaaagtatgtggaagtggaaccaatcagtattattgataaactttctttcgaa
aaacaagtactcggactgtatttatcagaccatcctattcgtccatttcaaaaattaatt
aacgattatacgaatgacacgatactttccatttctaataatcaaaaacacgtgaaacta
ggggtttacttgaatgaagtaaaaactatccgtacaaaaaaaggggagcaaatgtgtttc
gttaaaatcagtgattctagtggtgaaatggagggggtattatttccgaaaagttatcga
caatacagtgggttatgtagacaagggcaagtaacattactagagggaaccgtcgaagtt
agaaatgattcgaaacaattaattatacaaaaaatgaccgatatgaaagatatagaagaa
gcgaataagaaactctatcttcgtataccgtatttgttccagtcccatgaaagtttaatt
cgcataaaggaaattattcaatcacatcatggaggtatccctgttattttattttatgaa
catacccaaacaacgattcaacttcctagagtaaattgggtccaaccttccgagcaatgt
atagacgagttaatccgattattaggtgagcaaaatgtaattttacaatag
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