Heyndrickxia vini: I5776_07590
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Entry
I5776_07590 CDS
T07201
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bvj
Heyndrickxia vini
Pathway
bvj03410
Base excision repair
bvj03430
Mismatch repair
bvj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I5776_07590 (recJ)
03430 Mismatch repair
I5776_07590 (recJ)
03440 Homologous recombination
I5776_07590 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvj03400
]
I5776_07590 (recJ)
DNA repair and recombination proteins [BR:
bvj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
I5776_07590 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I5776_07590 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
I5776_07590 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
RNF180_C
DUF4254
KPBB_C
Motif
Other DBs
NCBI-ProteinID:
QQZ10748
UniProt:
A0ABX7E4U8
LinkDB
All DBs
Position
1536541..1538910
Genome browser
AA seq
789 aa
AA seq
DB search
MLKSKTRWIVQKTDENAIEHLVKELNITPLVAALLVNRGMTEIEEARNFIFSEGEDFHDP
FLLHSMEKAVKRIRQAIDEGEQILVYGDYDADGVTSTSVMITVLRDLGANVDFYIPNRFT
EGYGPNEEAFRWASSIGIKLIITVDTGIAAIHEANIAEELGIDLIITDHHEPGPILPGAL
AIVHPNHPESIYPFKELAGVGVAFKVAHALYGRVPEHLVDLASIGTIADLVPLRGENRLI
VKHGLKKLAVTERPGLQALFEITKTKQSDINEETIGFVIGPRLNAAGRLDSADPAVELLL
SNEQQEALNIAKEIDEMNKERQAIVNEITNEAIEMVENDPDLKDSHVLVIGKEGWNAGVI
GIVASRLVDKFYRPTIVLSYDRTTNLAKGSARSIAGFDLFRNLSTCRDILPHFGGHTMAA
GMTLNIDDVGDLRLRLNELAREILTKEDFVPLTAIDAVIPLEDIHLESIQQLRLLEPYGM
ANPKPKVLVENVSIQQIRQIGADHKHLKVILEKSGIQLDGVGFGLGNYVQDISPLATVSV
IGELAINEWNNNRKPQIFLKDIQINEWQLFDVRGNRPLKKWIKDVPDTNSFFIVFNEETI
SKIPNDEINGKVIHLTDLDEAGMDDMSGGNIVLLDFPPNKEKIEALIKKYNPSRIYTYFY
QRQNHFFSTIPTRDHFKWFYAFLRKRGPFNVQKFGKELAAHRGWSLETIDFMSKVFFELD
FVTIKNGLISLNPTTSKRDLLESTTYQEKLEKIKLENELLFSSYQDLKSWFDERMTCSEK
LEEETKQWT
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagtcaaagacccgttggattgtacagaaaacagatgaaaatgcaatagaacat
ctcgtaaaagagttaaacattactccgctagtagccgcattattggttaatcgtggaatg
actgaaatagaagaagcccgtaactttatattcagtgaaggggaggattttcatgatcct
tttctccttcatagtatggaaaaagcagttaaaagaattcgccaagcaattgatgaaggc
gaacaaattttggtatatggcgattatgacgcagatggtgtgacaagtacttctgttatg
ataactgtgttgcgtgatttaggtgcgaatgttgatttttatataccaaaccgatttacg
gaaggctacggtccaaatgaagaagcatttcgctgggcttcatcgattggaattaagctt
attataacggtcgatactggaatagcagctatacatgaggcaaacattgcagaagaacta
ggtatagacttaatcattacggatcatcatgaaccaggtccaatcttgccaggtgccttg
gcaatcgttcatccgaatcaccccgaaagcatctatccatttaaagaactagctggtgtc
ggtgtggcgtttaaagttgcacatgcactatatggacgtgttccggaacatttggtagat
ttggcttcaataggaacaatcgcagatttagttcctttgcggggagaaaaccggttgatc
gttaaacatggtctaaaaaaattagccgtaactgagcggccgggattacaggcattattt
gaaattaccaaaacaaagcaatcagatataaatgaggaaacaatcggattcgtcatcggt
ccacgcttaaatgctgcaggtagattggatagtgctgatcctgctgtagaattacttttg
agtaatgagcaacaagaagcattaaatattgcaaaagaaattgatgaaatgaataaagaa
cgccaggctatcgtcaatgaaataacgaatgaagcgatagaaatggttgaaaatgaccct
gatttaaaagatagtcatgtattagtaatcggtaaagagggctggaatgcaggggttatc
ggaattgttgcatcccgattagttgataagttttatcgtccaactatcgtattgagttat
gatcgaaccacgaatttggcaaaggggtccgcacgcagtattgcaggatttgatttgttt
agaaatttatctacctgtcgcgatattttaccccactttggtgggcacacgatggcagct
ggaatgacgttaaatatagatgatgttggtgatttgcgtttgcgtttaaacgagttagca
cgtgaaatcctaacgaaggaggactttgtacctttaactgcaattgatgctgttattccg
ttagaagatattcatcttgaatcgattcaacaactacgattgcttgaaccatatgggatg
gcaaatcctaagccgaaagtattagttgagaatgtgtcaatccagcaaattcgccaaatt
ggtgcagatcataaacatttaaaagttattcttgaaaagtcaggtatccaattggatgga
gttggatttgggttaggcaattatgtgcaagatatttctccactagctaccgtttccgta
ataggtgaattagccatcaatgaatggaataataatcgaaaaccgcaaatctttttaaaa
gatatacaaataaacgagtggcaacttttcgatgttcgcgggaatagaccattgaaaaaa
tggattaaagatgttccagatacaaatagcttctttattgtttttaatgaagaaacaata
agcaaaattcctaatgacgaaataaatggtaaggtaattcatttgaccgatttagatgag
gcaggaatggatgatatgagtggtggaaacatcgtcttacttgatttcccacctaataaa
gaaaaaatagaagcattaattaaaaaatataatccatccagaatttatacctatttctac
caaaggcaaaaccacttttttagtacgattccgactcgagatcattttaaatggttctat
gcttttttgaggaagcgtgggccatttaatgtccaaaagtttgggaaagaattagcggcg
catcgtggttggtcgttagaaacaattgattttatgtcaaaggtgttttttgaattagat
tttgttacaataaagaatgggcttatttcactaaatcccactacatcgaaaagggactta
ttggaatctacaacctatcaagaaaagttagaaaaaattaagttggaaaatgaattgtta
ttttcatcctatcaagacctaaaatcatggttcgatgaaagaatgacgtgttctgagaag
cttgaggaggaaacaaagcaatggacttaa
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