Heyndrickxia vini: I5776_07885
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Entry
I5776_07885 CDS
T07201
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bvj
Heyndrickxia vini
Pathway
bvj03030
DNA replication
bvj03430
Mismatch repair
bvj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I5776_07885 (holA)
03430 Mismatch repair
I5776_07885 (holA)
03440 Homologous recombination
I5776_07885 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvj03032
]
I5776_07885 (holA)
03400 DNA repair and recombination proteins [BR:
bvj03400
]
I5776_07885 (holA)
Enzymes [BR:
bvj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I5776_07885 (holA)
DNA replication proteins [BR:
bvj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I5776_07885 (holA)
DNA repair and recombination proteins [BR:
bvj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I5776_07885 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
EntA_Immun
Motif
Other DBs
NCBI-ProteinID:
QQZ10805
LinkDB
All DBs
Position
1593792..1594811
Genome browser
AA seq
339 aa
AA seq
DB search
MIDIWKQIEKMQFSPIYLLYGIESYLINETKQKLVKNVLTDEEMDFNLANYDLEETSIEV
ALEDAETFPFMGEKRLIFLHNAFFLTSEKGKQRVEHNLSKLEEYIQNPPPYTILVIIAPY
EKLDERKKITKQLKKHASILEAKKLNEIDLKKWVLQKVAENEVHIDDDAVDLLITLAGTN
LMMLSAEIDKLSLFVGVSNSIKGETVENLTSRSLEQNIFSLVDKVVHRKISEALRIYYDL
LKQNEEPIKILSILANQFRLLYQTKELQRRGYGQQQMATYLKVHPFRIKLAAGQAKLFSE
EELKRIMLLCADSDYQMKTSGMNKIMIIEMLLFKLSKSA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgattgacatatggaaacagattgagaaaatgcaattttcaccgatatatctattatat
ggaatagaaagctatttaatcaatgagacaaagcaaaaattagtgaagaatgtgttaaca
gatgaggaaatggactttaatttagctaattatgaccttgaagagacctccattgaagta
gcgttagaggatgctgaaacgtttccatttatgggtgaaaaaagattaattttcttacat
aacgctttttttctcacctcagaaaaaggaaaacaacgcgtggaacacaatttatcaaaa
ctagaggagtatatacaaaacccgcctccctacacgattttagttattattgctccttat
gaaaaacttgatgaacgaaaaaaaataacgaaacaattaaaaaaacatgcatccatacta
gaagctaagaaattaaatgaaattgatctgaaaaaatgggtgctacaaaaagtggcggaa
aatgaagttcatatagatgacgatgctgttgacttattaataactttggcgggaacaaat
ttaatgatgctttcagctgaaatagataaactctcattatttgtaggtgtttctaattca
attaagggcgaaaccgtagaaaatcttacctctcgctcattggaacaaaatattttttct
ttagtagacaaggtagtccatcgaaaaattagtgaagcgctaagaatttattatgatctt
ttaaaacaaaatgaagaaccgattaaaatattatcgatattagccaatcaatttcgcctt
ctttatcaaacgaaggaactccaaagaaggggatatggacaacaacaaatggccacctat
ctaaaagtccatccatttagaataaaacttgccgcgggacaagccaaactattttcggag
gaagagttaaaaagaataatgttattatgcgcggacagtgattatcaaatgaagacaagc
ggcatgaataagatcatgattattgaaatgcttctttttaaactgagtaaaagtgcataa
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