Heyndrickxia vini: I5776_12765
Help
Entry
I5776_12765 CDS
T07201
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bvj
Heyndrickxia vini
Brite
KEGG Orthology (KO) [BR:
bvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvj03032
]
I5776_12765 (topA)
03400 DNA repair and recombination proteins [BR:
bvj03400
]
I5776_12765 (topA)
Enzymes [BR:
bvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I5776_12765 (topA)
DNA replication proteins [BR:
bvj03032
]
Prokaryotic type
DNA Topoisomerases
I5776_12765 (topA)
DNA repair and recombination proteins [BR:
bvj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I5776_12765 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Zn_ribbon_ACC
Cys_rich_CPXG
Motif
Other DBs
NCBI-ProteinID:
QQZ07956
LinkDB
All DBs
Position
complement(2554014..2556089)
Genome browser
AA seq
691 aa
AA seq
DB search
MSEYLVIVESPAKAKTIERYLGKKYKVKASMGHIRDLPRSQMGVDTEHNFEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDVDIHSDCRVVFNEITKDAIKE
SFKHPRPINTDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREN
EIKNFIPEEYWTIVADFKKGKDTFQGSFYGINGKKVELKSEKEVKSILSQIKGKDFEITS
VSKKERKRNPAPPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRISEVAQEEAANFIQQQYGKEYIRTEQRKEKKSSNTQDAHEAIRPTSTMREPSVLK
EFLSRDQLRLYKLIWERFVASQMAQAIMDTMSVDLNNGEIVFRANGSKLKFSGFMKVYVE
GTDDQSEEKEKFLPQMVEGDIVKSDLVDPKQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALDNKRFIPTELGEIVLELIMEFFPEILDVEFTAKMEHNLDEIEEGK
IEWVKIIDDFYKGFYENLVKAESEMEKVEIKDEEAGEDCELCGNPMVFKMGRYGKFMACS
NFPDCRNTKPIVKEIGVKCPKCNEGNIIERKSKKKRIFYGCDRYPECDFLSWDKPIERKC
PKCEQLLVEKKLKKGVQVQCTNCDYKEKTVE
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtacttagtaatcgtggaatcgccggcaaaggcgaaaaccattgaacgatat
ttaggaaagaaatataaagtaaaagcatcgatgggacatattagggatttacctagaagt
caaatgggtgttgacactgaacataactttgaaccgaaatatataaccattcgaggaaaa
ggacctgttttaaaggaactgaagactgcagcaaaaaaagctaagaaagtatacttggcg
gctgaccctgatcgcgaaggggaagctattgcatggcatttggcacatagtttagatgta
gatatccattctgattgccgagttgtttttaatgaaattacaaaagatgccattaaagaa
tcatttaaacatccgcgtccaatcaatacggatttagttgatgcacaacaagcacgacga
attttggatcgcttagttggatataacatcagtccattattgtggaaaaaggtaaaaaaa
ggattaagtgcaggtcgggtacaatcagtagcagttcggttaatcattgatcgtgaaaat
gaaattaaaaattttatacctgaagaatattggacaatcgttgccgattttaaaaaagga
aaagatacattccaaggttccttttacggtataaatgggaaaaaagtggagcttaagtcg
gagaaggaagttaaatctattctttcccaaattaaagggaaagatttcgaaattacttct
gtatcaaaaaaggaaagaaagcgtaatcctgctccgccatttaccacttcttcacttcaa
caagaagcagccagaaagctaaatttcagagcaaaaaagacgatgatgttagcacaacag
ctatatgaaggaatcgatttaggaaaagaaggaacggttggtctaattacttatatgaga
acagattctactcgtatatctgaggttgcacaagaagaagctgcaaattttattcaacag
caatatggaaaagaatatattcgcacagagcagcgaaaggaaaagaaatcatctaatact
caagatgcgcatgaggccatccgtccgacaagtacgatgagagaaccgagtgtacttaaa
gaatttttaagccgtgatcaattaagattatataaattaatttgggaacgttttgtcgct
agtcaaatggctcaagcgattatggatacgatgagtgttgatttaaataatggtgagatt
gtttttagagcaaatggatccaaattgaaattttctggttttatgaaagtgtatgtcgaa
ggaacagacgaccaatccgaagaaaaggaaaaatttctccctcaaatggtggaaggagat
atagtaaaatcagacttggttgatccgaaacaacactttacacagccacctcctagatat
acggaggcacgtttagtaaaaacgcttgaggaactaggtattggacgaccatctacatat
gctcctacattagatacgattcaaaaaagaggatatgtagcccttgataataaaagattt
atccctactgaacttggcgaaattgttttagagctaataatggaattctttcctgaaatt
ttagatgtggaatttacagcaaaaatggaacataatctcgatgaaattgaggaaggaaaa
atcgagtgggtaaaaataattgatgatttttataaaggtttttatgaaaatctagtgaag
gccgaatcagaaatggagaaagttgaaattaaggatgaggaagccggcgaagattgtgaa
ttatgcggaaacccaatggtgttcaaaatgggacgatacggaaaattcatggcatgcagt
aattttccggactgtagaaatacgaaaccaatcgtaaaggaaattggggttaaatgtccg
aaatgtaatgaaggaaatataattgaaagaaaaagtaaaaagaaaagaatcttttatgga
tgtgatcgttatccagaatgtgatttcttatcatgggataagccaatcgaaagaaaatgt
ccgaaatgtgaacagcttttagttgaaaagaaactaaaaaaaggtgtccaagtacaatgt
acgaattgtgattataaagaaaagactgtggaataa
DBGET
integrated database retrieval system
