Heyndrickxia vini: I5776_14420
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Entry
I5776_14420 CDS
T07201
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bvj
Heyndrickxia vini
Brite
KEGG Orthology (KO) [BR:
bvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvj03400
]
I5776_14420 (addB)
Enzymes [BR:
bvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I5776_14420 (addB)
DNA repair and recombination proteins [BR:
bvj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
I5776_14420 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QQZ08262
LinkDB
All DBs
Position
complement(2870887..2874390)
Genome browser
AA seq
1167 aa
AA seq
DB search
MSVRFVIGRSGTGKTRFINNEIRTKLMDEPNGSPIIYLVPDQMTFLSEYSLIKTPGLGGM
IRAQVFSFSRLAWRILQETGGINRMHITNEGLNMLIRKIIEDKKDELRLFGRAADKTGFI
HHVEMMLTEFKRYCIHPEDIIGKQGEMENNGSKVLADKLHDLELIYCDFEEKLANKYLDS
EDYLTLLAESIQSSFYLQNAQIYIDGFHSFTPQEYLVVGQLMKVCKQVTIALTLDQPFRN
EISNDLHLFRMSSETYLTLSELAYAHGVEIEDNIVLKKLIRYTDDSLMHLEENFDNLPVK
PYDHQPQVQLFQAVNRRAEMEAAAREIRELVRINKFRYQDIAILVRNGHEYQEMLETCFS
DHQIPYFIDQKRTMLNHPLIELIRSTLEVITGFWRYESVFRAVKTDLLFPLTQSTEKLRE
KMDLLENYVLAYGIQGSKWTSKDRWIYRRFRGLEMEHSRQTDKEKEMEQEINNLRSLITT
PIIKLSKRMNKGVNGRDFCEALYLFLEELDIPAKLESLRNQAEDHGNLLSAREHDQAWNA
VIELLDQFVEILGDETITVKKFASILDAGIEAMKFSIVPPAVDQVLVANLELSRLSDVKV
AFIIGLNDGVMPAKINEEGVLADSDREMLITNGMKIAPSSKTRLLDEEFIAYKAFTTPSQ
KLYLSYPIANEEGKALLPSPYIKRMKEIFPEMIEKMIVNDPSELIDKEQIDYISHPNSAI
AFLTSQLQLKLRKYPVADIWWDVYNFYFENLQQKKRAKHVLSSLFYENRAKKLSAETSKE
LYGETILASVSRMELFHSCPFAHFSTHGLKLHERDIFKLEAPAIGDLFHGALKWIAENLQ
KNGISWSNLTKEQCNLLAKEAVAYLSPRLQHQILLSSNRYHYIKRKLEQVIGRASIILSE
HAKVSGFAPIGLELGFGPKAFLPPLSFTLKNGVKMELQGRIDRVDKAQDQNGVYLRIIDY
KSSQRELDLTEVYYGLALQMLTYLDIVVTHSKNLIGTEGLPAGVLYFHLHNPIIKSNRIL
TMDEIDDEIFKRFKMKGLLMEDTDVIKLMDQTLETGSSKIVSAEIKKDGSLSSRSQVASE
KDFSLMSHYVRNRYKKSGNDITSGIVDISPYKLKKKTPCEYCSFKSVCQFDQSLENNDYR
LLTPSKPEDILSRMREEVGINENIDTI
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcgctttgtcattggtcgttctggaacgggcaaaacaaggtttattaataat
gaaattcgaacaaaactgatggatgagccgaatggttcgccaatcatatatttagtaccg
gatcaaatgacttttttatctgaatatagtttaattaaaacccctggattaggggggatg
atacgcgcacaagtatttagtttttccagactcgcctggaggatcttacaagaaacaggc
ggcatcaatcgaatgcatattaccaatgaaggacttaatatgctgattcgaaaaattatt
gaagacaaaaaagacgagcttaggctatttggaagagccgctgataaaacagggtttatt
catcacgtagaaatgatgttaactgaatttaagcgatattgtatccatccagaagatatt
ataggtaagcaaggggaaatggagaataatggttcaaaggtacttgctgataaattacat
gatttagaattaatttactgtgattttgaggagaaattagctaataagtatcttgattcc
gaagattatttaacactgcttgcggaatcaattcagtcttccttttacttacaaaatgca
cagatttatatcgatggatttcatagttttacaccacaagaatatttagttgttggtcaa
cttatgaaagtatgtaaacaagtgacgatagccttgacattggatcagccattccgaaac
gagatatcaaatgatttacatttatttagaatgtctagtgagacttacttaacattatca
gaactggcttacgctcatggtgtagaaatagaagataatatagttttaaagaaactaatt
cgttatacagatgatagtttaatgcatttagaggagaattttgacaaccttcctgtgaaa
ccatatgatcatcaaccacaagttcaattatttcaagcggttaatcgaagagctgaaatg
gaagcagctgcccgagaaatccgtgagcttgtaagaataaataaatttcgttatcaggac
attgcgatcctagttcggaacggtcatgaatatcaggaaatgcttgaaacttgtttttct
gatcaccaaattccatacttcattgatcagaagagaacgatgttaaatcatcctttaatt
gaactcatacgatcaacgttagaggttataactggcttttggcgatatgaatcagtattt
cgcgcagtgaaaacggatttgttattcccactcacccagtctacagaaaaactgagagaa
aagatggacttgcttgaaaattacgttctagcatatggaatccaaggatcgaaatggaca
agcaaagatcgctggatttatcgaagatttcgtggtcttgaaatggagcattcgagacaa
acggataaagaaaaagaaatggaacaagaaattaataacttgcgttcattaataacaact
ccaattataaagctttcaaaaaggatgaataaaggtgtcaatggaagagacttctgtgag
gcattgtatttatttttggaagaactggacattcctgcgaagcttgaaagtttaagaaat
caggccgaggatcacggtaacttattatcagctagagaacatgatcaagcatggaatgcc
gtaatcgaattattagatcaatttgtagaaatattgggcgatgaaacaataacagtgaaa
aaatttgcaagtattttagatgctgggatcgaagccatgaagttttcaattgtgccgccg
gcagttgatcaagtactagttgcaaaccttgaattatcgcgattatcagatgttaaagtc
gctttcattattggtttaaacgacggtgtaatgcctgcaaaaatcaatgaagaaggcgtg
cttgcagattctgacagagaaatgttaataacaaatggaatgaagattgccccaagcagt
aaaacaagattacttgatgaggagtttatcgcctataaagcttttactacaccatcacag
aaactatatctttcatatccaattgcaaatgaggaaggaaaagcacttttaccgtctcct
tatataaaacgaatgaaagaaatttttccggaaatgattgagaaaatgatcgttaatgat
ccatccgaattaatagataaggagcaaattgattacatctcacatccaaattctgcgatt
gcttttttaacgtcacagttgcaattgaaattgagaaagtacccggttgctgatatatgg
tgggatgtttacaatttttactttgaaaatttgcagcagaaaaaacgagcgaaacatgtg
ctatcaagtcttttttatgaaaatcgggcaaagaagctttctgctgaaacgagtaaagag
ctatatggtgaaacgattttagccagtgtgtcaagaatggagctttttcattcctgtcca
tttgcccatttttcgacccacggcttgaaacttcatgaacgggatatatttaagcttgaa
gcacctgctattggcgatctattccatggggcattaaaatggattgctgaaaatcttcaa
aaaaacggtatttcttggtcaaatcttacaaaagaacagtgtaatcttttggcaaaagaa
gctgtagcttatttgtcaccaaggctccaacatcaaattttattaagctcaaatcggtat
cattatattaaaagaaaacttgaacaagttataggaagagcttcaataatactaagtgaa
catgctaaagtaagtggattcgctccaattggtttagagttgggttttggtccaaaagct
tttttaccaccgctatcatttacattgaaaaatggcgtgaaaatggaactgcaaggaaga
attgaccgtgtagacaaggctcaagatcaaaatggtgtatatttaagaattattgattat
aaatcaagtcagcgagagttagatttaaccgaagtctattatggcttggcacttcaaatg
ctcacttacttagatatagtcgttacccattcaaaaaatcttattggaacagaaggttta
cctgctggcgttttgtattttcatctccataatccaattattaaaagtaatcgaatatta
acgatggatgaaattgatgatgagatatttaaacgttttaaaatgaaaggtctgttaatg
gaagatacagatgttattaagcttatggatcaaacattggaaacaggcagttcaaagatt
gtatcggctgaaatcaaaaaggacggctccttatcgtctagatcacaagtagcttcagaa
aaggatttttcgctaatgagtcattatgtcagaaatagatacaagaaatcaggaaacgat
attacatccggaatcgttgatatttcaccatataagcttaaaaagaagacgccgtgtgaa
tattgttcatttaaatcggtttgtcaatttgatcagtcattagaaaacaatgattatcga
ttattaacaccgagcaaaccagaagatattctatcgcgcatgagagaggaggtaggaatc
aatgaaaacatcgataccatctaa
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