KEGG   Heyndrickxia vini: I5776_17720
Entry
I5776_17720       CDS       T07201                                 
Symbol
cas8c
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
bvj  Heyndrickxia vini
Brite
KEGG Orthology (KO) [BR:bvj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:bvj02048]
    I5776_17720 (cas8c)
Prokaryotic defense system [BR:bvj02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    I5776_17720 (cas8c)
SSDB
Motif
Pfam: Cas_Csd1 KH_YLL032C_5th Pfc11_Rna14-15-ID
Other DBs
NCBI-ProteinID: QQZ08838
UniProt: A0ABX7DZE4
LinkDB
Position
complement(3540087..3541295)
AA seq 402 aa
MSWLFNLYETYEANLDRVGEIEKKHNNQEYTLLPISHTTQNAHIEVTLTEDGEFHSARVI
DKDDASTLIPCTEESASRAGSKIAPYPLHDKLSYVAGDFVAYGGKIKKEEPFTYYIQQLK
DWANSPYTIQKVKSIYTYLSKKQLVKDLVEEKILWLDEEEKLIEKWDKKYESFIGYKPSI
FSVVAGGQESAFVRFNVHSSNKILTHVWKDPDMYKSFIQFYNDLLSDNDLCFVTGKSLPS
TERHANKIRNAADKAKLISANDTSGFTYRGRFNKSNEVASISYEASQKAHNALKWLINRQ
GKIVDQRVFLVWENNGQKIPDPTADAYDTFPSSSSVDTKVEKRSFTNQEFANEFAKALDG
YRNKLSSKADVNILIVDSATTGRLAVLYYRNMEKELYCKPEI
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgagctggttatttaatctttatgaaacgtatgaagcaaatttggaccgagttggagaa
atagaaaagaagcataataatcaggaatatacactgttgcctatttcacatactacgcag
aatgcgcatatagaagtaacacttacagaagatggtgaatttcactcagctagagtaatt
gataaggatgatgctagtacgctcattccgtgtactgaggaatcagccagcagagcaggt
tcaaaaatagcgccatatccattacacgataagctaagttatgtggcaggagacttcgtc
gcatatggtggaaaaataaagaaggaagaaccatttacatattatattcagcagctaaaa
gattgggcgaattctccttatacaattcaaaaagtgaaaagcatttatacgtatttaagt
aagaaacaattagttaaagatttagttgaagaaaagattttatggttggatgaagaagaa
aagttaatagaaaagtgggacaaaaaatatgaatcatttataggatacaaaccatcgatt
ttttcagttgtcgctggcgggcaagaaagcgcttttgtacgttttaatgttcattcttcc
aataaaattttaactcatgtgtggaaagacccggatatgtataaatcatttattcaattt
tataatgacttattaagtgataatgatttatgttttgttaccggaaaaagcttgccaagc
acggaaaggcacgcaaataaaataagaaacgcagcagataaggccaaattaatctcggcc
aatgatacaagtggtttcacctatagaggacgttttaacaaaagcaatgaggttgcaagt
attagttatgaagcatctcaaaaagcccataacgcattaaaatggttaattaatcgtcaa
gggaaaattgttgatcaacgcgtatttcttgtttgggaaaataatgggcagaaaattcca
gatccaacagcagatgcatatgatactttcccatctagttcttcagttgataccaaagtt
gagaaaagatcgtttactaatcaagagtttgcaaatgaatttgcgaaagcgctagatgga
tatcgaaataaactatcttcaaaagcagacgtaaatattttaatagtagattcagcaaca
acaggaaggttggctgttctctactatcgtaatatggaaaaagaactttattgtaagccc
gaaatataa

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