Heyndrickxia vini: I5776_19735
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Entry
I5776_19735 CDS
T07201
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bvj
Heyndrickxia vini
Pathway
bvj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I5776_19735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvj03019
]
I5776_19735
03009 Ribosome biogenesis [BR:
bvj03009
]
I5776_19735
Enzymes [BR:
bvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I5776_19735
Messenger RNA biogenesis [BR:
bvj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I5776_19735
Ribosome biogenesis [BR:
bvj03009
]
Prokaryotic type
rRNA helicases
I5776_19735
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
CMS1
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
QQZ09169
UniProt:
A0ABX7E1P7
LinkDB
All DBs
Position
complement(3971634..3973118)
Genome browser
AA seq
494 aa
AA seq
DB search
MTNFSELDLSPAILKSLKRMGFEEASPIQAKTIPLSTQGKDIIGQAQTGTGKTAAFGIPL
IEKIDTKNPNIQGIIIAPTRELAIQVSEELYKIGYDARSRVLAVYGGQDIQRQIKALKKG
PQIIVGTPGRILDHIKRRTLKLDQVSTLVLDEADEMLNMGFIDDIESILSSVPEERQTLL
FSATMPDPIRRIAERFMKDPELVRVKAKEMTVPLIEQYYVKVQEREKFDVLSRLIDVQSP
ELAIVFGRTKRRVDELANALNLRGYTAEGIHGDLSQAKRLSVLRKFKEGKVDVLVATDVA
ARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKEGMAITFVTPREMGYLKTVEQTTK
KRMMPMRPPSWDEAFEGQIRVSMEKLVETVKENGLSEYISIAKELLEENEATQIVAAALK
LMTKEPDKTPVHITEERPLPSKRDGQRSSSRRGKPSYGNKGGNGGNGNRKPRRSGRRDFN
RDNNKDYKRDHNRS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaatttttcagagttagatttaagccccgcaattttaaaatcactaaaacgaatg
ggctttgaagaagcatcaccaattcaagcgaaaacaatcccactaagtacccaaggaaaa
gatattattggtcaggcgcaaacaggaactggtaaaacagctgcctttgggattccgcta
attgaaaaaattgatacgaaaaaccctaatattcaaggaattattattgctccaacacgt
gaattagctattcaagtatctgaagagttatataaaattggatacgatgcaagatcacgt
gttttagcagtttatggtgggcaagatattcaacgtcaaattaaagcgttgaaaaaaggt
ccgcaaattattgttggaacaccggggcgtattctagatcatattaaacgtcgtacttta
aagcttgatcaagtttccacattagttcttgatgaagccgatgaaatgttaaatatggga
ttcattgatgatattgaatctattttatctagtgttccggaagaacgccaaacattactt
ttctcagcaacaatgccagacccgattcgtagaattgctgagcgattcatgaaagatcca
gaattggtacgtgtaaaagcaaaagaaatgacagttcctttaattgaacaatactatgtg
aaagtacaagaaagagaaaagtttgatgttctttctcgtttaatagatgttcaatcacca
gaacttgctatcgtttttggtcgcacgaaacgacgtgttgatgagttggcaaatgcctta
aatcttagaggttatacggcagaaggaattcatggcgacttaagtcaagcgaaacgctta
tctgttttgagaaagttcaaagaaggaaaagtagatgttttagttgcgacagatgttgct
gcacgtggtttagatatttcaggtgtaacacacgtttataactatgacatacctcaagac
cctgaaagttatgttcatcgtattggtcgaacaggccgtgcgggtaaagaaggaatggcg
attacatttgttacccctcgagaaatgggttatttaaaaacagtcgaacaaacaaccaaa
aagagaatgatgcctatgcgtccgccaagttgggatgaggcatttgaaggtcaaattaga
gtttcaatggagaaacttgtagagacagtgaaagaaaatggtctttcagagtatatttcg
attgccaaagaattattggaagaaaatgaagcaacacaaattgttgcggcagctcttaaa
ttaatgacgaaagagcctgataaaacacctgtgcatattactgaggaacgtcctcttcca
tcgaagagggatgggcaaaggtcttcttcaagacgcggaaagccatcttatggaaataag
ggtggtaacggcggaaatggcaaccgtaagccaagaagatcaggtagaagagacttcaac
agagataataataaagattacaaaagagatcataacagatcataa
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