Heyndrickxia vini: I5776_20305
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Entry
I5776_20305 CDS
T07201
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bvj
Heyndrickxia vini
Pathway
bvj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I5776_20305 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvj03019
]
I5776_20305 (recQ)
03400 DNA repair and recombination proteins [BR:
bvj03400
]
I5776_20305 (recQ)
Enzymes [BR:
bvj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
I5776_20305 (recQ)
Messenger RNA biogenesis [BR:
bvj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I5776_20305 (recQ)
DNA repair and recombination proteins [BR:
bvj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I5776_20305 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
HTH_40
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Sigma70_r4_2
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-ProteinID:
QQZ09274
UniProt:
A0ABX7E1Z3
LinkDB
All DBs
Position
complement(4089581..4091716)
Genome browser
AA seq
711 aa
AA seq
DB search
MLDEAKEILQEYFGYNDFRSGQNTIIEQVLEGKDTVAIMPTGGGKSICYQVPAMILPGIT
IVISPLISLMKDQVDALSNAGIPATFINSSISNSEMQERLQGIMSNEYKLLYIAPERLEA
PSFTQMLNQITVSMIAIDEAHCISQWGHDFRPSYLLIKKFIESIKPKPVILALTATATLQ
VKDDICHLLDISLKNVVLTGFGRENLIFKVVKGQDRDLFIEEYIKKNSLQSGIVYAATRK
EVDRIYLLLKKKGIQAGKYHAGMSEKDRNENQEQFLYDNIHVMVATSAFGMGINKSNVRY
VLHYHIPRNMEAYYQEAGRAGRDGVDSECILMFAPGDVHIQKFLIDQSEMDDERKEHEYG
KLRKMVSYCHTESCFQQYILEYFGEEGAIVCQKCGNCTDERTQVDVTKEAQMVLSCIKRM
NERFGKTFITKVLTGSSDKKIRSFGFNKLSTYGIMKDRTQKEVNELIDFLTAEGYLRPTD
GQFPVLLLTNQAVEVLRGESIVSRKERIQVKQIIEDNQLFEQLRQLRKEIADKEKVPPYI
IFSDQTLREMSAKLPSSKNELLQIKGVGERKLDQYGELFIAVITSYCEENGIVVEKHDDF
IMARSETTKDDKEKSHHITFTFLQQGLTIDEIAVKRNMTVRTVEGHLIKCAEDGISIDWN
QFIPSQYDELIKEAVNEADSQRLTPIKQLLPEEVSFFMIRAFLQREKEQKV
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgaagcaaaagaaattctccaagagtatttcggatacaatgactttcggagc
ggacaaaatactattatcgaacaagtactagaaggtaaggatactgtagcgataatgccg
actggtggaggaaaatcgatttgttatcaagttccggctatgatacttccgggtatcacg
attgttatttccccattaatttcattaatgaaagatcaggtggatgcattaagtaatgca
ggtataccagcgacgtttattaatagctccataagcaacagcgaaatgcaggaacggttg
cagggaatcatgtccaatgaatacaaacttttgtatattgccccggaaaggcttgaggct
ccgtcttttactcaaatgttaaaccaaattactgtatcgatgattgcaattgatgaagca
cactgtatttcccaatgggggcatgatttccggccaagttatttacttatcaaaaaattt
attgaatctattaaacctaaacctgttattttagctttaacagccactgcaaccctccaa
gtgaaggacgatatttgccacttactcgatatttctttgaagaatgttgttctaacaggt
tttggaagagaaaatttgattttcaaagttgttaaagggcaagaccgtgatttgttcatc
gaggaatatattaagaaaaatagtctccagtcgggtattgtttatgctgcaacaagaaaa
gaagtagaccgtatttatcttctgttaaagaaaaagggaattcaagcagggaaataccat
gccggaatgtctgaaaaggacagaaatgaaaaccaagaacaatttttgtatgacaatatc
cacgtgatggtagcaactagtgcatttgggatgggaattaataaatcaaatgttcgctat
gtcttgcattatcatattcctagaaatatggaagcttattatcaagaggctggacgtgcc
ggtcgagatggggtggatagcgaatgtattttaatgtttgcacctggggacgtccatatc
caaaagtttttaatcgaccaatcagaaatggatgatgaacgtaaagaacatgaatatgga
aaacttcggaagatggttagttactgccatactgaatcttgttttcaacaatatatttta
gagtattttggggaagaaggcgcgatagtgtgccaaaagtgcgggaattgtacagacgaa
cgcacccaggtagatgttacaaaggaagcacaaatggtgttgtcatgtataaaaaggatg
aatgagagattcggaaaaacatttattacgaaagtgttgacaggatcatctgataaaaag
attagaagttttggctttaataaattatcaacgtacggaattatgaaggaccgaacccaa
aaagaagtgaatgaactaatcgactttttaacagcagaggggtatttgcgtccaacggat
ggacaatttcctgttttattgttgaccaatcaagcagttgaagtgttacgtggggaaagt
atagtatcaagaaaagaaagaatacaagtgaaacagattattgaagataaccagctgttt
gaacaattaaggcagttacgtaaggaaatcgcagataaggaaaaggtgccaccgtatatt
attttttcggatcagactttgagggaaatgagtgcaaaacttccatcttcgaaaaatgaa
ttattacaaattaaaggggtaggggagagaaagcttgatcaatacggagagttgtttatc
gcagttattacatcctactgtgaggaaaacggaattgttgtagaaaagcatgacgacttt
attatggcaagaagtgaaacaacgaaggatgataaagagaaaagtcatcatataactttc
acatttcttcaacaaggcttaaccattgatgaaattgccgttaaacgaaatatgacagtg
cgcacagttgaaggacacttaattaaatgtgcggaagatggcatttcaattgattggaat
caatttatcccctcacaatatgatgaattaataaaggaagcagtaaacgaagcggattct
caaagattgacacctattaagcagttgctccccgaagaagtcagcttttttatgatacga
gcatttctacaaagggaaaaggagcagaaagtataa
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