Bombus vosnesenskii (yellow-faced bumblebee): 117230183
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Entry
117230183 CDS
T07592
Name
(RefSeq) ATP-dependent RNA helicase WM6 isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
bvk
Bombus vosnesenskii (yellow-faced bumblebee)
Pathway
bvk03013
Nucleocytoplasmic transport
bvk03015
mRNA surveillance pathway
bvk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117230183
09122 Translation
03013 Nucleocytoplasmic transport
117230183
03015 mRNA surveillance pathway
117230183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvk03019
]
117230183
03041 Spliceosome [BR:
bvk03041
]
117230183
Enzymes [BR:
bvk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117230183
Messenger RNA biogenesis [BR:
bvk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117230183
Spliceosome [BR:
bvk03041
]
Complex C
Other components
EJC/TREX
117230183
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
117230183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117230183
NCBI-ProteinID:
XP_033343217
UniProt:
A0A6J3JR38
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQLVDGSRDTPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIIDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNVCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
SKFTLI
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatgatgatctcttggattacgaagatgaagaacagactgaacaattagtt
gatggaagtagggatacacctgctaaaaaagaagtgaagggcacatatgtatctattcac
agtagtggatttagggattttcttcttaaaccagaaatattacgtgcaattattgattgc
ggttttgaacatccatctgaagtacaacatgaatgcattccccaagcagtacttggtatg
gatatattatgtcaagcaaaatctggcatgggaaaaacagctgtatttgtgctggctaca
ttacaacaattagaattaacagagaaccaggtctatgtccttgtcatgtgtcatacacga
gaacttgctttccaaattagcaaagaatatgaacgatttagcaaatatatgcctcatgtg
aaagtcggtgtattttttggtggtttaccaattcaaaaagatgaagaagtcctaaagaac
gtatgtcctcatattgttgttggtacaccaggtcgtatccttgctcttgttcgaaataaa
aaattaaatctgaaacacttgaagcactttatactcgatgaatgtgataaaatgctcgag
ctattagacatgcgcagggacgtacaggaaatatttagaagcactccacacggtaaacaa
gtcatgatgttcagcgctacattgtccaaggagatacgtcctgtctgcaaaaagttcatg
caagatcccatggaagtctatgtggatgatgaagcgaaactcacgttgcacggtctacaa
caacattatgtgaaactaaaagagaatgaaaagaacaagaagctatttgaattacttgat
gtacttgaatttaatcaggtcgttatctttgtaaaatctgtacaaaggtgtatggctttg
gcacaacttctaacagaacaaaattttcctgcgattggtatacacaggggtatgactcag
gaagaacggctatcaaggtaccaacaatttaaagatttccaaaagcgaattttggtagct
acaaatttatttggacgcggtatggatattgagcgtgtaaacatagtgtttaattacgat
atgccagaagattcggacacatacctacatcgagtagccagagctggtcgtttcggtacc
aagggtcttgctattacattagtcagtgatgaaagtgatgctaagatactaaacgatgtt
caagaacggtttgatgttaatattacagagttaccagatgagatagatctagcttcatac
agtaagtttactttaatataa
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integrated database retrieval system
