Bombus vosnesenskii (yellow-faced bumblebee): 117231623
Help
Entry
117231623 CDS
T07592
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
bvk
Bombus vosnesenskii (yellow-faced bumblebee)
Pathway
bvk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117231623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvk03041
]
117231623
Enzymes [BR:
bvk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117231623
Spliceosome [BR:
bvk03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117231623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
nSTAND3
AAA_30
Flavi_DEAD
SLFN-g3_helicase
ResIII
T2SSE
nSTAND_NTPase5
Cas3-like_C_2
TsaE
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
117231623
NCBI-ProteinID:
XP_033346117
UniProt:
A0A6J3JZ91
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MSKYRKKESSSEDSDSEEERRKKDIKERDEFANRLKAKDESKIRKVAMPAGSGAAEAAKR
LKIMETDMREKLVPKLRVESRRKYLEKRKEDKVAELEADIIDDEYLFEEEILTERERKER
EHKKQLLQLAKEHEKARELERLQRYYMPLEKGKVAPELEVPDNEPPQSEQSKWESDQMSS
AVFRFGAKDRKAQQDYDLLLEDEVEFVQALRMPGSEKNRKREDSPPPQVKALQTIQETKR
SLPIYPFRNDLIQAIKDHQVLIIEGETGSGKTTQIPQYLYEAGFAENNKIIGCTQPRRVA
AMSVAARVAHEMAVKLGNEVGYAIRFEDCTSHRTRIKYMTDGTLHREFLSEPDLASYSVM
IIDEAHERTLHTDILFGLVKDITRFRTDLKLLISSATLDATKFSEFFDDAPIFRIPGRRF
PVDIYYTKAPEADYIDACVVSILQIHATQPPGDVLVFLTGQDEIETCQEMLQERVRRLGS
KLGELLILPVYANLPSDMQAKIFQPTPLGARKVVLATNIAETSLTIDNIVYVIDPGFAKQ
NNFNSRTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYQHELEDNTVPEIQR
INLGNAVLTLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHRGELTKLGRRMAE
FPLDPMMAKMLLASEQYRCSEEVATIAAMLSVNGAIFYRPKDKIIHADTARKNFHVPGGD
HLTLLNVYNQWQQSDFSTHWCYENFIQHRSMKRARDVREQLVGLMQRVEMELVSGITETL
NIRKAITAGYFYHVARLSKGGHYKTAKHNQTVSIHPNSSLFQELPRWLLYHELVFTTKEF
MRQVTEIESKWLLEVAPHYYKPKELEDSTNKKMPKVAGRSHPDGTY
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaatacagaaaaaaggaatcctcgagtgaggacagtgatagtgaggaggaaaga
cgtaagaaagatattaaagaaagagacgagtttgctaatcgactgaaagcaaaggatgaa
agtaaaatacgaaaggtggctatgccagctggttcaggtgcagctgaggctgccaagaga
ctcaaaattatggaaacagacatgcgagagaaattggtacccaaactgcgtgttgagtct
cgtaggaaatacttggagaaacgtaaagaggataaggtggctgaattggaagctgatata
attgacgatgaatatctgtttgaggaggaaatattaacagaacgggaaaggaaagagcgg
gagcataaaaagcagttgcttcagttagccaaagaacatgagaaagccagagaacttgaa
aggttgcaacgttactatatgcctttggaaaagggaaaagtggcaccagaattggaagtt
cccgataacgaaccgccacaatccgagcaaagcaaatgggaatctgatcagatgtcttct
gctgtctttcgatttggcgcaaaagacagaaaagcacaacaggactacgatcttctgctg
gaagatgaagtggagttcgttcaagcgttacgtatgcctggcagtgagaagaacaggaaa
cgcgaggatagtcctcctccgcaagtaaaggcgttacagactatacaggagacaaaaagg
agtttaccgatctatccctttagaaatgatctcattcaggctatcaaagaccatcaagtg
ctgataatcgagggagaaacgggttcagggaaaactacgcaaattcctcaatatctatac
gaagctggattcgcggagaataataaaattattggctgtacgcagccaagaagggtagct
gccatgtctgttgctgcgagagttgctcacgaaatggctgttaaattgggaaatgaagtg
ggttacgcgattcgtttcgaggattgcacctctcatcgtactcgtatcaaatatatgact
gatggtaccctgcaccgtgaatttctcagcgaaccagatttggcttcttacagtgttatg
atcatcgacgaagcacacgaacgtaccttgcacacggatatcttgtttggtttagtaaag
gatataacaaggtttcgaacagatctaaaactcctaatttcgtccgctacgttagacgct
acgaaatttagtgaattcttcgacgatgcaccgatatttcggatacctggtcgccggttt
cccgttgatatttattataccaaagcaccagaagcggattacatcgacgcttgcgtagtc
tccattcttcaaatacacgccactcagccacctggcgatgtactggtgttcctaacaggt
caagacgagatagaaacatgtcaggaaatgttgcaagaaagagtaaggcgactaggttcg
aaattaggagaactgttaatcctacccgtatatgctaatcttccaagcgatatgcaagca
aaaatatttcaacccactccgcttggagcgagaaaagttgttcttgctacgaacatagca
gagacatcattaacgatagacaacatagtgtacgtgatagaccctggattcgcgaaacag
aacaattttaattcccgaacaggcatggaaagtttaatggtcgtgccgattagcaaagct
tctgcgaatcagagagcaggcagagctggaagagtagctccaggaaagtgctttcgactg
tacacagcttgggcttaccaacacgaactcgaagacaataccgtgcctgaaattcagagg
atcaatctaggaaatgccgtgctgaccctgaaagctctgggaataaatgatttagtccat
ttcgacttcctggatcctccgccgcatgaaacgttggtcttagctttagaacagctatac
gcgttgggagctttgaatcatcgcggagaattaacgaaactgggtcgaagaatggctgaa
tttccgctagatcctatgatggcgaagatgttgctggctagcgaacaatatcgctgctcg
gaggaagtagccacgatagctgccatgttatctgtgaacggagccatattctacaggcct
aaggacaagatcattcacgcagacacggctcgaaagaatttccatgtgcctggtggcgat
catttgactttattgaacgtgtacaatcagtggcagcaaagtgattttagtactcattgg
tgttacgagaatttcattcaacatcgttcaatgaaaagagctagagatgttagggagcaa
ttagtcggattgatgcagcgagtcgagatggaacttgtgtcgggtatcacggaaacgctg
aatatcaggaaggctatcacagcaggatatttctatcacgtggcaagattgtcaaaagga
ggtcactataaaactgcaaaacataatcagacggtttccattcaccctaatagctcgtta
tttcaagagctgccgcgttggttactttatcatgagttggttttcactacaaaggaattt
atgagacaagtgacagagatcgaaagcaagtggcttttggaggtagcacctcattattac
aaaccaaaagaactagaagattctacgaataaaaaaatgccgaaagttgcaggacgatcg
cacccagacggaacctactaa
DBGET
integrated database retrieval system
