Bombus vosnesenskii (yellow-faced bumblebee): 117233728
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Entry
117233728 CDS
T07592
Name
(RefSeq) polyadenylate-binding protein 1
KO
K13126
polyadenylate-binding protein
Organism
bvk
Bombus vosnesenskii (yellow-faced bumblebee)
Pathway
bvk03015
mRNA surveillance pathway
bvk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117233728
09123 Folding, sorting and degradation
03018 RNA degradation
117233728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvk03019
]
117233728
03041 Spliceosome [BR:
bvk03041
]
117233728
Messenger RNA biogenesis [BR:
bvk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
117233728
mRNA cycle factors
Stress granule specific factors
117233728
Spliceosome [BR:
bvk03041
]
Complex C
Other components
Complex C specific factors
117233728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RBD_DEAH11
RRM_10
Nup35_RRM_2
RRM_occluded
POP1_C
Motif
Other DBs
NCBI-GeneID:
117233728
NCBI-ProteinID:
XP_033350173
UniProt:
A0A6J3KAP6
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MNPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFS
AFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFIPRKER
EKELGEKAKLFTNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFE
DPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYV
KNLDDSIDDERLRKEFAPFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRII
VTKPLYVALAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYFVPTIPQPQRFY
GPAQMAQIRTTPRWPAQPNQVRPNAQTGSSGFATMQGPFRAAPRAPTAQPGAMRSTLSAR
PITGQQTVGGANMQNRSMAGPAVGVTAQSRPSNYKYTSNMRNPPQAMAIPAPTPVQQAVH
IQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQCMYPQLTGKITGMLLEIDNSELLHMLE
HNESLKAKVEEAVAVLQAHQAKQAVASKKE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctggagctccaaattaccccatggcctcactttacgtgggtgacttgcatagt
gatatcacggaggcgatgcttttcgagaagttttcctcggctgggcccgtactctcgata
cgcgtctgtcgtgatatgattactcgacgttcgctcggttacgcttatgttaacttccaa
cagcctgctgatgcggaacgtgctctagataccatgaactttgacatgataaaggggcgg
ccaattcgtatcatgtggtctcaacgtgatccttctcttcgaaaatctggtgttggaaat
gtctttattaaaaatttagataaaaacatagacaataaagcaatgtatgatacgttctct
gcttttggtaacatacttagttgcaaagtagctcaagatgaatctggcgtttctaaaggt
tatggttttgtgcattttgagacggaggaagcagcaaataaatccattgatagagttaat
ggcatgttgcttaatggaaaaaaggtatatgttggtaaatttataccccgtaaagaacgc
gagaaggaattaggagagaaagctaagcttttcaccaatgtttacgtaaagaattttggg
gaagatatgacagacgacaaacttaaagatatgtttgaaaaatatgggaccatcaccagt
cataaagtaatgattaaagatgacggaaaatctcgaggtttcggttttgttgcttttgag
gatcctgacgcagctgaacaagctgtacttgaattaaatggaaaagaggtcgctgaagga
aagtgtatgtacgtcggacgggcacaaaagaaggcagagcgtcagcaagaacttaagagg
aagttcgagcaattgaaattagaacgtttaaatcgttatcaaggtgtaaatctatacgta
aagaatttggacgatagtatagatgacgagcggttgcgcaaagaatttgcaccgttcgga
actattacctctgcgaaagttatgatggaagaaggacgcagcaaaggctttggatttgtc
tgtttttccgctcctgaagaagctacaaaagctgtaacagagatgaacggtcgcataata
gttactaaaccattatatgttgctctggctcagcgtaaagaagatcgtaaagcacatctt
gcttctcaatacatgcaacgtttagcaaacatgcgtatgcagcaaatgggtcaaatattc
cagcctggtggtgccggaaattatttcgttcccactattccacagccgcaaagattctat
ggacctgcacagatggcccaaattcgtacaactccccggtggccagcgcaacctaatcaa
gtacgacccaatgcacaaactggaagttcaggttttgctacgatgcaaggtccatttagg
gctgcaccgcgtgctcctactgcacaacctggtgctatgcgaagtacattgtctgctcga
cctatcacaggtcaacaaacggttggtggtgcaaatatgcaaaatcgttccatggctggc
ccagcagtcggagttacagctcaaagccgtccgtcaaattacaaatacacttcaaacatg
cgcaatcctccacaagcaatggcaattcctgctcctactcctgttcaacaagccgttcat
attcaaggccaagaaccactaactgcctcaatgttggcagctgctccaccgcaagagcag
aaacaaatgttgggagagcgtctcttcccattgattcaatgtatgtatccgcaacttact
ggaaagatcactggaatgttgttggagatcgacaattcagagctcctgcacatgttggag
cataatgaatcgctgaaagccaaggttgaagaggccgtagctgtattgcaagctcatcag
gccaaacaggctgtggcttctaaaaaagagtaa
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