Bombus vosnesenskii (yellow-faced bumblebee): 117235390
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Entry
117235390 CDS
T07592
Name
(RefSeq) protein SMG7-like isoform X1
KO
K14409
protein SMG7
Organism
bvk
Bombus vosnesenskii (yellow-faced bumblebee)
Pathway
bvk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117235390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvk03019
]
117235390
Messenger RNA biogenesis [BR:
bvk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
117235390
mRNA cycle factors
Common to processing body (P body) and stress granule
117235390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
ExsD_C
Motif
Other DBs
NCBI-GeneID:
117235390
NCBI-ProteinID:
XP_033353251
UniProt:
A0A6J3KLZ3
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MENFTVSAYKTFYIEIQGTQNMGLNAAVQALKKAEPLKDKVQRCRDLLNDSDAWVCQQQL
QKIYQQVLILDLEYALDRKVEQELWNLGFKNYIATLQSQAKDRKNPKRGESQALLSWCLE
AASGFYLTLLQEICTAFDLDLPFRRKGYIYGCTSPWKAIEKLSVPHKSSCFYACQYCLVH
LGDIARYRNESKQAELFYRHAVSLSPSSGQPYNQLALLEASRGNKLATVFHYTRSVAVKH
PFPVATTNLAKTLSSALNDTSLNIDGKTKLSSQEYVAVFLKLHGVIHNLGDLKVASTYAK
LLTETLTALVATESFSSWMLVQMFVINLYALEHTTSVVMGNNEPLRHEQLTSDEKIARDC
ILDLIAGSLSALLLPVYTIKNSIIDYFALPSIKLCLDWIHTKPTVLEELAFTSRLQIWPS
LCVLLNALQNCVADFAYDQYIKVPLPEDRDLQGFLPLEKSFECLKFTSTDLEDNVEASNK
LRAVRILRLGHCLAQYKVNGTALIAITLGEEKGDNRFSSMSEGNGLSNELMKELEELSLN
RGRQSAVSTSPVLSESASSKGSTDVDMLEHALDKRIGILKPQGSLERSKDTVLITSTESS
TFETNVQPTTRKPRQNIAMQTIMRRAETEQKQVTFKNLSPLNVEEESEKKFKLSGASVSP
VKGVPPGGSKNMVVGEISKANNVSNAIANTPITVQSRLPLMPSATSTVQSPIITTQNQVK
TTKLQHTVSAPQSSQINHLSVKEQQASGISTPISGISQCVGTICYQNPTFNVQNPQFTKN
YVTNHVGNLSSYPIQGHFTSSVQQSMQSQSIGLQYTSSQNRSMHQRAQTHNIPQNTLLHQ
NLGVLSSAQPSNVIPNASQNINSQQSRNIGVQQNRSLNTQQNHNLNVQQQNVMKTSLRPS
TISLHNQGSLPNSTIANVSTLSTLNTYQKKLHHAAPVIPNASNVPSNSLNPTTTPNFQYN
FNQNDFNQNTFGQVPQKQLSSVYNKNSDVLEFSLPNHLGMSKNQSQSTTNYPLFQNYETT
NFNLWKDTQQSQHSIPCWGSTSRSMQLHSEDTSVIENYHNWEDSSNPGNIMSQIPLRTSN
SYPSDSQQTKHFGTGSNFESSRSLEVDSKSNQSISTGNTYSLFSSNNAWGSNVQSCNVSN
QDQTKTRLNQQSLWFGPGPSPLERLLEQQKSLREGGT
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggaaaattttactgtttctgcctataaaacattttatatagaaattcaaggtacacag
aatatgggcctaaacgcagctgtacaagctttaaagaaagcagagcctttaaaggacaaa
gtacaacggtgcagagatcttctaaatgatagtgatgcgtgggtatgccagcaacagcta
cagaagatatatcaacaagttctgatattggatctggaatatgctttggaccggaaagtt
gagcaggaactttggaatctaggatttaaaaattatatagcaactttacaatcccaggca
aaggataggaaaaatcctaaacgtggagaatctcaagctttacttagctggtgcttggaa
gctgctagtggtttttatttgacattattacaagaaatttgtactgcatttgatttagat
ttaccatttagaaggaagggttacatttatggatgtacatcaccatggaaagctattgaa
aagttatcagtgcctcataaatcttcatgtttttatgcgtgccaatattgccttgtgcat
ttaggggatattgctcgttatagaaatgaaagtaaacaagcggagttattctacaggcat
gctgtatcattgtcaccatccagtggacaaccatacaatcaattggcccttcttgaggca
tcgcgcggtaacaaattggcaactgtttttcattacacacggtctgtagctgtaaaacat
cctttccccgttgccacaacgaacttggcaaaaacattatcgtccgctttgaacgatacg
tcgctgaatatagatggaaaaacaaaattatcttctcaagaatatgtagcagtttttttg
aaacttcatggcgttatccacaatcttggcgacttaaaagttgcttcaacatatgcaaaa
ttattaactgagacattgacagccttagttgctactgaaagttttagctcttggatgctt
gttcaaatgtttgtgattaacttgtatgccttggaacatacaacgagtgttgtcatgggt
aataatgaaccgttaagacacgaacaattaacatctgacgaaaagattgctcgtgattgt
attttggatctcatagctggaagcctgtctgctttattgttacctgtttatacaatcaaa
aattctattattgactatttcgctttgccttctataaaactgtgccttgattggattcat
acaaaacccacagttttggaggaactagcttttacatcgagacttcaaatttggcccagc
ttatgcgtattgttgaacgctttgcaaaattgtgtggccgatttcgcatatgatcaatat
attaaggtaccactgccagaggatcgtgacctacaaggattcttaccgttggagaaaagt
ttcgaatgtttaaaatttacgagtaccgatttagaagataatgtcgaggcttccaataaa
ctgcgtgcagttcgtattcttcgtttaggtcattgtttagcacaatataaggtcaatggt
actgcgttaattgctattacattaggtgaagaaaagggtgacaacaggttcagttctatg
agtgaaggaaacggtttgagtaatgaattgatgaaagaattagaagaactcagtttaaat
agaggaagacagtctgctgtatcaactagtccagttctctcagagtctgccagcagtaaa
ggttctaccgacgtcgatatgttggaacatgccttagataagaggataggtatcttgaag
cctcaaggttcgttagagcgaagtaaagacacggttttgatcacctctacggaatccagt
acttttgaaactaatgtccaacctactacaaggaaaccaaggcaaaacatagcgatgcaa
acgataatgcgacgtgctgaaactgaacaaaaacaggttacgtttaaaaatttgtctcca
ttaaacgtagaagaggagagtgaaaaaaaatttaaattgagtggagcatcagtgagtcca
gtaaaaggtgtccctccaggtgggagtaaaaatatggttgttggagaaatatcaaaggcg
aataatgtttcaaacgcgattgcgaatacaccaatcaccgttcaaagtcgattaccgttg
atgccttctgctacatctactgtgcaaagcccaatcattaccactcaaaatcaagtaaaa
accacaaaattacagcacactgtttcagcaccacaatcttctcaaattaaccatctttct
gtaaaagaacaacaagcgtccgggatttcgactccaatatctggaatatctcaatgtgta
gggactatttgttatcaaaatccaacatttaatgttcagaatccacaatttacgaaaaat
tatgtcacgaatcatgttggaaatctatcgagttatccgattcaaggacattttactagt
tcagtacaacaatcgatgcaatcacagagtataggtttacaatatacatccagtcaaaat
aggtctatgcatcagagagcacagactcataacatacctcagaatacattgttgcatcaa
aatcttggagtactgtcttcagctcagccgagtaatgttataccaaatgcttcacaaaat
attaattcccaacaaagtagaaatattggcgtgcagcaaaatcgtagtttgaatactcaa
cagaaccacaacttgaatgtgcaacaacagaatgttatgaaaactagtcttagaccaagc
acaatatctttacataatcaaggttcattacctaattcaactattgcaaatgtttctact
ttgtcaacattaaatacatatcaaaagaaacttcatcacgctgctcctgttataccaaat
gcatcaaatgtaccaagcaattcgctaaatccgacaactacgcccaattttcaatataat
tttaatcagaatgattttaatcagaatacctttggtcaagtaccacaaaagcaattgtcg
tccgtgtacaataagaattcggatgttttggaattttcgttaccaaatcatttaggtatg
tcaaaaaatcagtctcagtccacaactaattatccgcttttccaaaactatgaaaccaca
aatttcaatctgtggaaagacactcaacagtcacaacattctataccttgctggggttca
actagcagaagcatgcaattacatagtgaagatacgtctgtcattgaaaactatcataat
tgggaagactcctctaatcctggaaacataatgtcacaaattccattgagaacttcaaat
agttatccatcagattctcaacaaaccaagcattttggtactggaagtaatttcgaaagt
tctagatctttagaggtagacagcaaatcaaatcaatcaatcagcacaggaaacacgtat
tctctatttagcagtaacaatgcatgggggtctaatgtacaaagttgtaatgtgtcaaat
caagatcaaacaaaaactcggcttaatcaacaatctttatggtttggacctggaccatct
cccttggaacggcttttggaacagcaaaaatcattacgtgaaggaggtacctga
DBGET
integrated database retrieval system
