Bombus vosnesenskii (yellow-faced bumblebee): 117235659
Help
Entry
117235659 CDS
T07592
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
bvk
Bombus vosnesenskii (yellow-faced bumblebee)
Pathway
bvk04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
bvk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117235659
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bvk00536
]
117235659
Glycosaminoglycan binding proteins [BR:
bvk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117235659
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
117235659
NCBI-ProteinID:
XP_033353795
UniProt:
A0A6J3KLC6
LinkDB
All DBs
Position
Unknown
AA seq
1508 aa
AA seq
DB search
MGPKALRLAAAFAVIQLLLPQVHSIRTKLRKQRSKPLQAQQAANGEYDYDYYEGYDDYDD
RNETTTTTAPSPPVTSSVNTASRGELPTETLQTFYRPGLSTDVPTQATIRTFSQVGILPN
EVQTTPEQNHASPTEIVPGESNVISAVAVPGPRGEPGRPGDMGRPGDAGFPGHPGSPGIP
GPPGPPGPIPDVSMYYQQLALSQANQDKGPTGAAAPLYGPEAYLQMQTGPIGPRGPSGPP
GPPGPQGFQGVRGEPGEPGTLGPPGAPGPRGLAGLPGKDGNTGEDGEPGPPGSVGPVGPR
GLPGMPGLPGVKGHRGFPGLDGAKGEQGVSGEKGSMGVPGPMGHVGPMGPAGPRGERGRE
GPPGPPGIRGVDGIAGPPGQPGTVGKPGSPGFPGSPGVKGDQGAQGPKGSQGIQGPRGET
GRPGQPGESGPQGPQGKDGIPGEKGSTGAAGLVGAPGFPGARGQPGIPGNPGVPGAKGMP
GLSGERGFKGDSGAKGDSGTPGPRGLPGPPGNEGKRGKRGMRGPIGTSGPAGERGAPGAP
GLPGPDGPMGPKGQSGDRGPIGPMGLRGANGDPGRPGSPGLQGTRGLMGRPGAPGKPGNP
GDRGIQGADGKPGEQGPAGLQGLPGPIGLPGEKGYPGEPGKAGEPGNPGPPGPRGDTGKE
GAPGPQGSPGPSGVDGERGPPGSPGPRGFQGFPGVTGNPGTPGKDGESGVQGPPGPPGIP
GNRGERGFPGERGTPGGPGLTGPRGEPGAQGLDGPPGLPGAKGDRGISGPPGLVGLPGLR
GATGESGPKGERGSSGPPGPEGPSGRIGERGPQGQIGSPGPPGEPAERGDPGLPGPPGEV
GAPGNPGERGPQGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGDQGNPGLPGSPGETGPQ
GLVGLTGAKGVRGEPGARGEPGIMGPPGVPGIVGATGPPGAIGPSGPPGLPGSKGNIGET
GRAGNPGPIGNPGSPGADGNKGESGSQGPPGTPGPQGPQGSPGERGLPGLPGPSGPIGAR
GIRGAPGESGVPGKPGPEGPPGPPGQVGPIGPHGPSGEIGAEGPSGKPGPPGIAGRPGDK
GPPGAVGQTGLPGSPGLPGPPGQAGAPGSTGERGPKGETGPQGVEGQQGPRGKPGPIGLE
GPKGDRGEEGQKGAKGHRGFTGLQGLPGPTGLPGEKGIPGLPGLPGKDGESGPRGSPGRD
GSPGPIGLTGNPGPKGPSGEEGRHGPPGPPGPPGPPGPPGELGLGYDAASLAALLGQGQT
KGPDPLVGDEPPRMFSQDMTEEERKELILKAYKQLKSSFQKFVKPDGGKSSPAKTCKDLY
TAYPDKLSGEYWIDPNEGDARDAILVYCDAKKRATCLLPNPVRSPEINYITDQPETWLSE
IENGMKITYKADSNQIGFLQLLSRHAYQNIIYHCKNSIGYFDSERKTYRKGMKFLTWNDV
ELTPRGNQRLRYEMITDECRTYNGQWGKTVISYETDKPVRLPIIDVALRDIGKPDQSFSI
EIGTVCYE
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggggccgaaggcccttcggttagccgcggcgttcgccgtcatccaacttcttttgccg
caggttcattccatacggaccaaactcaggaaacaacggtccaagccgctgcaagctcaa
caagccgccaatggtgaatacgattacgactattacgagggttacgatgactacgatgat
agaaatgaaactacaactacaactgcgccatcaccacctgttacgtccagcgtcaatact
gcaagcaggggtgaattaccgacagagacattgcaaactttctacagacctggactgtct
acagatgtaccaacgcaagcgacaattcgaactttcagtcaagtcggtatattaccaaac
gaagtgcaaacaacaccagaacaaaatcatgcatcaccgacagagattgttcctggtgaa
agtaacgtgattagcgcggttgctgttcctggacccaggggcgagcctggtcgacctgga
gatatgggtcgtccgggagatgctggatttccaggacaccctggatctccgggaattccg
ggacctccggggccaccagggcctatacctgacgtatcaatgtattatcaacaattagct
ttatctcaagcaaatcaagataaaggaccgacgggagcagcagcacctttgtatggtcca
gaagcctacttacaaatgcaaactggtcctattggaccgcgtggtccatcaggtccacct
ggaccacctggaccacagggttttcaaggagtacgaggagaacctggtgaacctggaact
ttgggtcctccaggagcgccaggtcccagaggattagctggtctaccgggaaaggatggt
aataccggtgaagatggagaacctggtcctccaggatcggttggtccagtcggaccaaga
ggtctaccagggatgcctggtcttcctggtgtaaaaggacaccgaggttttccagggtta
gatggtgcaaaaggggaacaaggtgtatctggtgagaaaggatccatgggcgtacctgga
ccgatgggacatgtaggcccgatgggccctgcaggtccacgtggtgaaagaggtagagaa
ggtcctcctggacctccaggaattagaggagtggatggtattgctgggccccctggtcaa
cctggtacggtaggtaaaccaggttctcctggatttccaggtagtccaggtgtaaaagga
gatcaaggagcacaaggaccaaaaggaagccaaggcatacaaggccctcgaggtgaaact
ggtcgtcctggtcaacctggtgaatcaggaccgcagggtccccagggaaaagatggaata
cctggagaaaagggaagtacaggagcagctggtttagttggtgctccaggtttccctgga
gctcgcggacaacctggaatacctggcaatcctggtgttccaggagcgaagggcatgcct
ggactttcaggtgaaagaggattcaaaggtgatagtggagctaaaggtgattcaggaact
ccaggaccacgtggtttgcctggtcctcctgggaacgagggtaaacgaggaaaaagagga
atgcgcggaccaattggtacatccggtcctgccggagaacgtggagcaccaggcgcacca
ggtcttccgggacctgatggccccatgggacccaaaggtcagtctggagatcgtggacca
attggaccaatggggctcagaggagctaacggagatcctggtcgcccaggatctcccggt
ttacagggcacacgtggtttaatgggtcgccctggtgctcccgggaaaccaggaaaccca
ggagaccgaggaattcaaggtgctgatggaaaaccaggtgaacaaggtccagctggatta
caaggtttacctggtccaataggtctcccaggagaaaaaggatatccgggtgaaccagga
aaagctggtgagccgggaaatcctggaccacctggacctagaggtgatacgggaaaagaa
ggagcaccaggacctcaaggttcacctggaccatcaggagtagatggtgaacgaggacct
ccaggatctccaggtcctagaggttttcagggtttcccaggcgttactggtaatccagga
acaccaggaaaagatggagaatcaggtgttcaaggaccacctggtccaccaggtatacct
ggaaatagaggtgaacgaggatttcctggtgaaagaggtacaccaggaggaccaggatta
acaggaccaagaggagaaccaggtgcacaaggattagatggacctcccggattacctgga
gcaaaaggagatcgaggaatttcaggaccacctggattagtaggattgcctggcttacga
ggagctacgggagagtcaggcccgaaaggagaaagaggatctagcggaccgcctggccct
gaaggaccttcaggacggattggagagcgtggcccacaaggtcaaattggctcaccggga
ccgccaggtgaaccagcagaacgaggcgatcctggattacctggacctccaggagaggta
ggtgctcctggcaatccaggagaaagaggaccccaaggattacaaggactgcaaggcttc
ccaggaccacaaggactcattggtttaccaggattaaagggtgaccgtggttatccaggt
ttaaaaggagatcaaggaaatcctggtctacctggtagcccaggtgaaactggaccacaa
ggtctagttggtttgacgggagctaaaggagtacgaggagaaccaggtgctagaggagag
cctggtattatgggaccaccaggagtaccaggaatcgttggtgcaacgggcccgccaggc
gcaataggaccatcaggaccgcctgggttaccaggtagtaaaggtaatattggagaaaca
ggacgagccggaaatcctgggcctattgggaatccaggttcacctggtgcagatggaaat
aaaggcgagagtggttctcaaggaccaccaggtactcctggtcctcagggtcctcaaggc
tctcctggcgaaagaggattacctggtttaccaggtccgtctggaccaataggcgctaga
ggaatacgaggagcacctggtgaatccggtgtacctgggaaacctggaccagaaggtcca
cctggacctcctggacaagttggaccaattggaccacatggaccatcaggagaaattgga
gcagaagggcccagtggtaaacctggaccacctggaatagcaggtcgtcctggagataaa
ggaccaccgggagcggtaggacaaacgggattacccggatctcctggtttacccggacca
cctggtcaagcaggtgctccaggatcaactggagaaagaggaccaaagggcgaaacagga
ccacaaggtgtagaaggacagcaaggacctagagggaaaccaggacctataggattggaa
ggtcctaaaggtgatcgcggagaagaaggccagaagggtgcgaaaggccatcgaggattt
actggtttacaaggtttacccgggcctactggtctaccaggggagaaaggaatacctgga
cttcctggactacctggaaaagatggcgaatctggacctagaggtagtcctggacgagat
ggcagccctgggccaattggattaactggcaatccaggaccaaaaggtccttcaggtgaa
gaaggtcgccatggaccaccaggtcctcctggtcctccagggcctccaggtccacccggt
gaacttggattaggatatgatgctgcttctttagctgcacttttaggacaaggtcaaact
aaaggaccagatccattagttggtgatgaaccacctagaatgtttagtcaagacatgaca
gaagaagaaaggaaagaactcattttgaaggcatataaacaattgaaatcatcattccag
aaatttgtaaaaccagatggtggaaaaagttcaccagccaaaacttgcaaggacctttat
actgcatatccagataaactttctggagaatattggattgatcctaacgaaggtgatgca
agagatgcaattttagtgtattgtgatgctaagaaacgtgcaacatgtttattgcctaat
cctgtacgttccccagaaattaactatattactgatcaaccagaaacttggttaagcgaa
atagaaaatggaatgaagattacatataaagcagacagtaatcaaattggctttttgcaa
cttctatcgagacatgcataccaaaatataatatatcactgtaaaaatagcataggctat
tttgattctgaacgaaagacatatagaaaaggtatgaaatttttaacctggaatgatgta
gaattaacaccacgtggaaatcaacgtctaagatatgaaatgataactgatgaatgtaga
acatataatggacaatggggtaaaacagtaatttcatatgaaactgataagcctgtaaga
ctacctataatagatgtggccttacgagatattggaaaaccagatcaaagcttttctatt
gaaatcggtactgtttgttatgaataa
DBGET
integrated database retrieval system
