Bombus vosnesenskii (yellow-faced bumblebee): 117236434
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Entry
117236434 CDS
T07592
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
bvk
Bombus vosnesenskii (yellow-faced bumblebee)
Pathway
bvk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117236434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvk03041
]
117236434
Enzymes [BR:
bvk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117236434
Spliceosome [BR:
bvk03041
]
Complex C
Other components
Step II factors
117236434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_30
AAA_16
ATPase_2
AAA_24
ATPase
PhoH
Sigma54_activ_2
Sigma54_activat
cobW
ABC_tran
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
117236434
NCBI-ProteinID:
XP_033355266
UniProt:
A0A6J3KT36
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MDISNESNLYRLEGIEKNQAGGLIIRKKPSDHTFKKPQVSVLGLDKLAKRKRQENSQEVN
SLKSESSSLKSEIKERKYRSYAEETPTHTGGVNTEAQQRLEARLKHQRLSAQDKNHRHNY
KDKDRNRDRDRNRDRYRDRDRERSRSRDSVRDSSRQTPLRFKDEPQTPIFKTKDSTSKSN
WDDDEDEEPRKSSWDHPTPNLYNIRDGRDSVRSEFTPSYKYNPWNRDRKASGATPNIIGE
EKEMWDLWEEEQQRLDREWYALDDGENHAFADVSEEYTRKKEMELEAKRQKRLSAQQRQI
NKDNELWERNRMLTSGVISSLDHDDDPDDEGETRVHLLVHNVVPPFLDGRIVFTKQPEPV
VPVRDPTSDMALVARKGSALVRAYREQKERKRAQKKHWELAGTHIGNIMGVRDRHKDDKE
DPGQETDFKAGQKYARHIRDEVTGEAKYRSIQHQRRSLPVFAVRQELLNVIRENSVVVIV
GETGSGKTTQLTQYLHEDGYSCYGIIGCTQPRRVAAMSVAKRVSDEMATALGDKVGYAIR
FEDCTSKDTVIKYMTDGILLRESLREGDLDRYSVIIMDEAHERSLSTDVLFGLLREVVAR
RHDLKLIVTSATMDSSKFSAFFGNAATFQIPGRTFPVEVLHAKNPVEDYVDAAVKQVLQI
HLQPRSGDVLVFMPGQEDIEVTCEALKERLAEIESAPPLSILPIYSQLPSDLQAKIFQRS
EGGLRKCVVATNIAETSLTVDGIVFVVDSGYCKLKVYNPRIGMDALQVYPVSRANADQRA
GRAGRTGPGTCYRLYTRRQYLDELLLTGVPEIQRTNLANTVLLLKSLGVQDLLGFHFMDP
PPQDNILNSLYQLWILGALDHTGRLTPLGRQMAEFPLDPPQCQMLIVASQLGCTADILII
VSMLSVPSIFYRPKGREEDSDSAREKFQVPESDHLTYLNVYNQWKANGYSSSWCNVHFIH
AKAMRKVREVRQQLEEILKQQKMEVVSCGTDWDIVRKCICSAYFHQAARLKGIGEYVNCR
TGMPCHLHPTSALFGMGFTPDYVVYHELVMTGKEYMQCVTAVDGHWLAELGPMFFSVKET
GRSGRAKRRQAMQHLHEMEGQMKEAEEEMKARAQEQLEREQASIRKKEILTPGIREPGTP
APYRKTPSRLGL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggatatatcaaatgagtcgaatttgtatagattagaagggattgaaaaaaatcaagca
ggaggtttgattattcggaagaaaccctctgatcatacatttaagaagcctcaggtatct
gtcttgggtcttgacaaacttgcaaaacgaaaaagacaagaaaattcacaggaagttaac
tcattgaaatctgaatcaagttcactaaaatcagagattaaggaaagaaaatacagatct
tatgctgaagaaactccaacgcatactggcggggtgaacactgaggcacaacaaagatta
gaagcacgattaaagcatcaaagattgagtgcacaggacaaaaatcataggcacaattat
aaggacaaagatcggaatagagatagggataggaatagagatcgatacagagatagggac
agagaaaggagtagaagcagagacagtgttagagatagtagtagacaaacacccttaagg
tttaaagatgaacctcaaactccaatatttaaaacgaaggattcaacatctaaaagtaat
tgggatgatgatgaagatgaagaaccaagaaaatccagttgggatcatccaacacccaat
ctatacaatattagagatggtagagacagtgttagaagtgaatttacgccttcatataaa
tataacccttggaatagagatcgaaaagctagtggtgctacacctaacataattggggaa
gaaaaagaaatgtgggacttgtgggaagaagagcaacaaagattggatagagaatggtat
gccttggatgatggagaaaatcatgcgtttgctgatgtttctgaagaatacacccgtaaa
aaggaaatggaattggaagcaaaaagacagaagcgtctttccgcacaacagcgacagata
aataaagataacgaattgtgggaacgtaacagaatgttaacatctggtgtcatcagttct
ttagatcatgatgatgatcctgatgatgaaggagaaaccagagtacatctcttagtccat
aatgttgttccaccatttctggatggtcgaattgtattcactaaacaaccggagcctgtt
gtacctgtacgtgatcctacttctgatatggcacttgtagcaagaaaagggtctgctttg
gtacgagcatatcgtgagcagaaagagcggaaaagggcgcaaaagaaacattgggaacta
gctggaactcatattggtaatatcatgggtgtacgtgatagacacaaagatgataaggaa
gatccaggtcaagaaactgacttcaaagctggccaaaaatatgcgcgtcatatacgagat
gaagttactggagaagctaaatacaggtccattcaacaccagaggagaagtcttccagta
tttgctgtacgacaagaattgttaaatgtaattagagaaaacagtgtagtagttattgtt
ggagaaactggcagtggaaaaacaactcaattgactcaatatcttcatgaagatggttat
agttgctatggtataattggatgtacacaaccaagaagagtagcagctatgtctgtggca
aaaagagtttctgacgaaatggctactgctttaggagacaaagttggttatgctattcgt
tttgaggattgcacttcaaaagatactgttattaaatatatgactgatggtattttatta
agagaaagcttaagggaaggagatttggatcgatatagtgtaattatcatggatgaagct
catgaaagatctttatctactgatgtcttatttggtttattgagagaggttgtagccagg
cgacatgatctgaaattgatcgtaacatctgctacaatggactctagcaaattttcagca
ttttttggaaatgctgcaacattccaaatcccaggtcgtacatttccagttgaagtatta
cacgccaagaatccagtagaagactatgttgatgctgcggtgaaacaagtgttacaaatt
catttgcaaccccgttcaggcgatgtattggtctttatgcctggtcaggaagacattgaa
gttacttgtgaggctttgaaagaacgtttagcagagatcgaatcagctcctccactttcc
attttacctatttactcgcaactaccctcggatttacaagctaaaatttttcaacgttca
gagggaggtttacgaaaatgcgttgtagcaacaaatatagccgaaacttcattaactgtc
gatggaattgtattcgtcgtggactcgggctattgcaagttgaaagtttataacccacga
attggtatggatgctttacaagtatatccagtgtccagagcaaatgctgatcaaagagca
ggaagagcaggacgtactggtcctggtacctgctacagattatacacgcgaaggcaatat
ttagacgaactactattaactggagttccagaaatacagcgaaccaatttagcaaatact
gtattgttactgaagtctttaggtgttcaagatttattgggttttcattttatggatcct
ccaccacaagataatatattaaattctctgtatcaattgtggattttgggtgcattagat
catacaggacgtttaacacctttgggacgacaaatggcagaatttccactagacccacca
caatgtcagatgctcattgttgcttctcaactcggttgcactgcagatatacttattata
gtttctatgctgtcagtgccttcgatattctaccgacccaaaggtcgcgaagaagattct
gattcagctcgagagaagtttcaagtaccagagtctgaccacctaacatatttaaatgtg
tacaatcagtggaaggcgaatggttattccagttcttggtgtaacgttcactttattcac
gcgaaagctatgcggaaagtaagagaagttcgacaacagctggaagaaattctgaaacaa
caaaagatggaagttgtaagctgtggcacggactgggacattgtacggaaatgtatttgt
tcggcatactttcaccaagcagctcgtttaaaaggtattggtgaatacgtgaattgtcgt
actggaatgccatgtcatcttcatccgacgtcagctttgttcggtatgggcttcacgcca
gactacgtggtgtatcatgaacttgtgatgactggcaaggagtacatgcaatgtgtgact
gctgttgatggccactggctagccgagttgggtcctatgttctttagcgtaaaggaaact
ggacgaagcggacgagcaaaaagacgacaagccatgcaacatttacatgaaatggaaggg
cagatgaaagaagcggaggaagaaatgaaggctagggcgcaagaacaacttgaacgtgaa
caagcttctatcaggaagaaggagatattgacgccaggtatcagagaaccgggtacacct
gctccttatcgtaaaactccaagtagattggggttataa
DBGET
integrated database retrieval system
