Bombus vosnesenskii (yellow-faced bumblebee): 117238011
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Entry
117238011 CDS
T07592
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
bvk
Bombus vosnesenskii (yellow-faced bumblebee)
Pathway
bvk03013
Nucleocytoplasmic transport
bvk03015
mRNA surveillance pathway
bvk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bvk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117238011
09122 Translation
03013 Nucleocytoplasmic transport
117238011
03015 mRNA surveillance pathway
117238011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvk03019
]
117238011
Messenger RNA biogenesis [BR:
bvk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117238011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
117238011
NCBI-ProteinID:
XP_033358397
UniProt:
A0A6J3KZJ0
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSCEELNATKETQSSEQTDGHQDSECDIYPSDSDAESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTIDEVTDSAVESQNERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKPGSNVSNKNRKFNRSGEDFPALGTNKNASTHVEEPVISSAWYSSKNK
SQNKVQNFPPLQAQGDSLKSKSSNTSNTHTNENKAPNEPTNPAWKKDTKHSSHIQSSNGN
SGAGGDADKLINTKISSRDNNKRNVQESVSLAASRTRGRGFRTNANNNMVTNRTVEIKPK
GRGTGSITTENKRNNIQNDDEQQITHDMKHISVADGTQYHQSGRHNKSFYGQSSNQQRSG
TVPPRMQQQQPQQQQQQQSIQQQDGSANRPKRYSSLRQRSTVSDNPGPQNYPPQHGQHGQ
HNQHNQHNQHNQHGQHGQHGYFPPQAGNSRGVLDSQGYPQGHFEQTTSVATATAPMTGQP
VIPIPPNGQPASYAPPPFLVPPPQFISPQTAPPSIINYVPGPNGPAFQPNFQGYQGYSSP
VQPQRPPPPQELFQPQGCTYYSPAQQQQQQQQSAPMRRPKAAIPILPPPENQHQTSRGRG
KTTQPQQTNQLGNTQQTEQEVKINSIESDQKTVPEQFDNTETEQAEIQETEKIDGSSAIA
NPVVENTEKDIKILDIGTPLNLGDTTTDQLDDISANDSSKVTMKEENIISLKAMEPVIEK
AENDSNKVENTTTESTVVEEAVA
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacaagacgacgacgaaaatctaatcagtcttgtggttctgatgacctctcg
gactcttgtgaagaattaaacgcaacgaaagaaacccagagcagcgagcaaactgatggt
catcaggattcagaatgtgatatctatccttctgattctgatgctgaatctcaagatggt
gcattgcgagaaagtggagatgggcaagaagaagaaaaaccgcagaaaaagctggatgat
gatgaagacagacgtaacccacaatatatccctaaaaggggaacattttatgaacatgat
gatagaaccattgatgaagtaacagatagtgcagttgagtcacaaaatgagagagaaacc
aaagaaaaaaaagtatggaaagataaagaagatagatgggatcatgatcgatataatgat
gaagaacaggcaccaaagagccatgaagaattaatagctgtttatggctatgacataaga
aatgaagaaggtccacctagagctagaagaagaagaagatatggccgtggtcctaacaaa
tatacgcgtaattgggaagatgaagatgcatatggaaagcctggaagtaatgtttcaaat
aaaaatagaaagttcaatagaagtggagaagattttcctgctttaggaacaaataagaat
gcttccacacatgtagaagaaccagtaatttcatcagcttggtacagtagtaagaataag
tcacagaataaagtacaaaattttccacctctacaagctcaaggtgatagtctgaaatca
aaatctagcaatacgtctaatactcatacgaatgaaaataaggctcctaatgaacctaca
aatccagcctggaaaaaggatactaaacattcgtctcacattcagagcagtaatggaaat
agtggagctggtggtgatgcagataaattgattaatacaaagatatcttcaagagataat
aacaagaggaacgttcaagagtctgtaagcttggcagcgagtagaacacgtggacgagga
ttcagaacaaatgctaataacaatatggtcaccaatagaacagttgaaatcaaaccaaag
ggacgcggaaccggatcgattacgactgagaataagagaaataatatacagaatgatgat
gagcagcaaattactcatgacatgaaacacattagcgttgctgatggtactcaatatcat
caaagtggaagacataataaaagcttctatggacagtcctcaaatcagcagagatcagga
acggtacctccaagaatgcagcaacaacaaccacaacagcaacaacaacaacaatcaatt
cagcagcaagatggttctgctaataggccaaaacgttattcaagtttgcgacagcgatct
actgtttcggataatccaggaccacaaaattatccaccacaacatgggcaacatggacaa
cacaatcaacacaatcaacacaatcaacacaatcaacatggccagcatggtcaacatgga
tattttcctcctcaagctggaaattcaagaggtgttttagattcacaaggatatccacaa
ggacattttgagcaaaccacatctgttgctactgcaactgcacctatgactggtcagcct
gtaattcctataccacctaatggtcaacctgccagttatgctccaccaccatttttagta
ccaccacctcagtttatttctccacaaactgctccacctagtataattaattacgttcct
ggtccaaatggaccagcatttcaaccaaatttccaaggttatcaaggttatagttcacca
gtacagccacaacgtcctccacctccacaagaattgtttcaaccacaaggttgtacttac
tatagtccagcgcagcagcaacagcaacaacaacaatcagctccaatgagacgaccaaaa
gcagctattccaattcttccaccaccagagaatcaacatcagaccagtcgaggaagaggt
aaaactacacagccacaacaaacaaatcaacttggtaatacacaacagactgaacaagaa
gttaaaattaactcaatagaaagtgatcagaagactgtgccagaacagtttgataataca
gaaactgaacaagcagaaattcaagaaacagagaaaatcgacggttcgagtgcaatagcg
aatcctgtggttgagaataccgaaaaagatattaaaattcttgatatcggaacaccactg
aatttgggagatactactaccgatcaattagacgatataagtgctaatgattcatcaaaa
gtcactatgaaggaggaaaatattatttcgcttaaagctatggaaccagtcattgaaaag
gctgaaaatgattcaaacaaagtagaaaatacaacgactgaaagtacagttgttgaagaa
gcagtagcttga
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