Bombus vosnesenskii (yellow-faced bumblebee): 117238107
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Entry
117238107 CDS
T07592
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
bvk
Bombus vosnesenskii (yellow-faced bumblebee)
Brite
KEGG Orthology (KO) [BR:
bvk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bvk03041
]
117238107
03016 Transfer RNA biogenesis [BR:
bvk03016
]
117238107
Enzymes [BR:
bvk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117238107
Spliceosome [BR:
bvk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117238107
Transfer RNA biogenesis [BR:
bvk03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
117238107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117238107
NCBI-ProteinID:
XP_033358638
UniProt:
A0A6J3KZ52
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MTAFEEMGVLPEIAKAVDEMEWTLPTDVQAEAVPLILGGGDVLMAAETGSGKTGAFCLPV
LQIVWETFKDLESGKTGKTSSNSGHQQHSSHWSLSLFDRGKALAVTPDGLRCQSREQKEW
HGCRANKGILGKDKYFFEAIVTDEGLCRVGWSTSQASLDLGTDKFGFGYGGTGKKSNAKQ
FDNYGKAFGMHDVVGCLLNLSKGEISFTLNGVDLGPAFTLNAQQKSQTFYPAVVLKNAEM
SFNFGAQPFKYPPPNDYIAVASAPKEVINENPINSSQTHKENGKPKCNAPQAIIMEPSRE
LAEQTYNQIQKFKKHLKDPVIRELLVIGGVSVKEQIATLNSGVDIVVGTPGRLEDLIQGG
YLSLTHCRFFILDEADGLLKQGYTELIDRLHRQIPKITSDGKRLQMIVCSATLHAFEVKK
MAERLMHFPTWVDLKGEDAVPETVHHVVVIIDPQKDKSWHNLRKHIETDGIHNRDNIRPG
NNNPETLSEAVKILKGEYCIRAIKEHNMDRAIIFCRTKLDCDNLERYLKQSDRNEFLCVC
LHGDRKPAERKSNLEKFKRQEVKFLICTDVAARGLDISGLPFMINMTLPDEKSNYVHRIG
RVGRAERMGLAISLVSKVPEKVWYHGEWCPSRGRNCSNTNLTDKGGCCIWYNEPNYLAEI
EDHLNVTIQQVDADIKVPLNDFDGKVVYGEKKAAMGSNYQNHVQQMAPYVNELSSLESKT
QLLYLKRHMVKTS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacggcattcgaagaaatgggtgttttacccgaaatcgcgaaagcagttgacgaaatg
gagtggacattgccaactgatgttcaagctgaggcagttccactaattttgggtggtgga
gatgtgttaatggctgcagaaactggcagtgggaaaactggtgccttttgtctaccagtt
ttgcaaattgtctgggaaactttcaaggatctagagtctggtaaaacaggcaagacctcg
agcaatagtggacatcagcaacattcttcacattggtcattaagtttatttgatagaggt
aaagcattagctgtgactccggatggcttacgatgtcagagtcgtgaacagaaagaatgg
catggctgtagagcaaacaaaggaattctagggaaagacaaatacttctttgaagctata
gtaactgatgaaggattatgtcgtgtaggctggtctacgtctcaagcttcactggattta
ggaacagataaatttggttttggatatggtggtactggcaaaaaatcaaatgcaaaacaa
tttgacaattatggaaaggcttttggaatgcatgatgttgttggatgtcttctgaattta
tcaaagggagagattagcttcacattgaatggtgtggatctgggtccagcatttactctg
aatgcacaacaaaaatcacagactttttacccagctgtagtattgaaaaatgcagaaatg
tcattcaattttggagcacagccatttaagtatccccctccaaatgattatatagctgtt
gcttcagctcctaaggaagttataaatgagaatcctataaacagtagccaaactcataag
gaaaatggcaagcctaaatgcaatgcccctcaagctataatcatggaaccttcgagagaa
cttgctgaacaaacatataatcaaattcaaaaatttaaaaaacatttgaaagatccagtc
attagagaattgttagttattggaggagttagcgtaaaagaacaaattgctacattaaat
tccggtgtggatatagtagttggaacaccaggtcgtttagaagatttaatacaaggcggc
tacttgtccttaacacattgcaggtttttcattttggatgaagccgatggtttattgaag
caaggctacacggaattaatcgatcgtttgcacagacagataccaaaaattacatcagat
gggaaaagattacaaatgatcgtttgttctgccacactgcatgcatttgaagttaaaaaa
atggcggaacgtttgatgcactttccaacgtgggtagacttaaaaggtgaagatgcagtt
cccgaaacagtacaccatgttgttgtaataatcgatccacagaaagataaatcttggcac
aacttaaggaaacatatagaaactgacggtattcataacagggataacataagacctgga
aataacaatcctgagacactctcagaggctgtgaaaatactaaaaggtgaatactgtatt
cgtgccattaaagaacacaacatggacagagctataattttctgtagaactaaattagac
tgcgataacttggaacgatatttgaaacaatctgatagaaacgaatttttatgcgtatgt
ctccacggtgatagaaaacctgcggaacgcaaatctaatttagagaagttcaaaaggcag
gaagtaaagttcttgatttgtaccgatgtcgcagctagaggtttagatatttcgggatta
ccttttatgattaatatgaccctacctgatgaaaaatccaactacgtacatcgcataggt
agagtcggtagagctgaacgaatgggtctagcaatttcattagttagtaaagttcctgaa
aaagtatggtatcatggcgaatggtgtccttctcgtggaaggaactgttccaatactaat
cttactgataagggtggttgttgcatttggtacaacgaaccaaactacttggctgaaatt
gaggatcatttaaatgtcacgattcaacaagtcgatgcagatataaaggttccattaaat
gatttcgatgggaaagttgtatacggagaaaagaaagcagccatgggttcaaattaccaa
aatcatgtacagcaaatggcgccctacgttaacgaattatcttctttggaatcaaaaaca
caacttttatatttgaagaggcatatggtaaaaacgagctaa
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