KEGG   Bombus vosnesenskii (yellow-faced bumblebee): 117240266
Entry
117240266         CDS       T07592                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
bvk  Bombus vosnesenskii (yellow-faced bumblebee)
Brite
KEGG Orthology (KO) [BR:bvk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bvk03041]
    117240266
Spliceosome [BR:bvk03041]
 Complex B
  Other components
   Complex B specific factors
    117240266
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd LisH_TPL WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_ACSF4 Beta-prop_TEP1_C Beta-prop_VPS8 Beta-prop_Nup120_160 Beta-prop_Aladin Beta-prop_DCAF4 Ge1_WD40 Beta-prop_Vps41 Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_IP5PC_F WD_LRWD1 PROPPIN WD40_like LisH_WDR26 VPS8_N LisH_PAC1 DUF7165 Beta-prop_LRRK2 zf_topless
Other DBs
NCBI-GeneID: 117240266
NCBI-ProteinID: XP_033362135
UniProt: A0A6J3LAB9
LinkDB
Position
Unknown
AA seq 510 aa
MSIEIESADVIRLIQQYLKESNLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAYIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVRDQEDEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMAFSRDSEMLAGGGQDGKIKVWRVQSGQCLR
RFEKAHSKGVTCLQFSRDNSQILSASFDTTIRIHGLKSGKTLKEFRGHASFVNEVVFAPD
GHNVISASSDGTVKVWSLKTTECIGTYKSLGAADLTVNSIHVLPRNPEHFVVCNRSNTVV
IMNMQGQIVRSFSSGKREGGDFVCTVVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLTHHPHQNLLCSYSEDGLLKLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcaattgaaattgaatctgcagacgtaattcgtttgatacaacagtatcttaaagaa
tcaaatcttgtcaaaacattacaaacattacaggaagaaacaggtgtatcattgaataca
gtggatagtgtagatggttttgtagcagatataaataatgggcattgggatacagtatta
aaagctatacagtcactaaaattgccggataagaaacttattgacttatacgaacaggtt
gtcttagaattaattgaattaagagaattaggagcagctcgatcattattgaggcaaaca
gatcccatgattatgatgaaacaacaagaacctgaaagatatatacatctagaaaattta
cttgcacgttcatatttcgatccacgtgaagcatatcctgatggaagtacaaaagagaaa
cgaagagcttacatagctacagctcttgctggtgaagtatcagttgtaccatcaagtaga
ttacttgcattattgggacaagcattaaagtggcaacaacatcaaggtttacttccacct
ggtactacgattgatttgtttagaggaaaagcagcagtgagagatcaagaagatgagaag
taccctactcaactttcaaaacagattaagtttggtcaaaaatctcatgtagaatgtgca
cgtttttcaccagatggtcagtatttagttactggttctgttgatggatttattgaagta
tggaatttcacaactggtaaaatcaggaaagatttaaaatatcaagctcaagacaatttt
atgatgatggagcaagctgtattatcaatggcttttagtcgtgatagtgaaatgttagct
ggtggtggacaggatggtaaaataaaagtgtggagagttcaaagtggacaatgtttaaga
agatttgaaaaagcacattcaaaaggtgttacatgccttcagttcagtagagataacagc
caaattttatctgcatcatttgatactactataaggatacatggacttaaatctggaaaa
actttaaaagaatttcgaggacatgcttcctttgtaaatgaagtagtttttgccccagat
ggacataacgtaataagtgcatcatcagatggaactgtaaaagtttggagtttaaaaaca
acagaatgtataggtacatataagtccctaggagctgcagatttaactgttaatagcata
catgtccttccacgaaatccagaacatttcgtcgtgtgtaatcgttcaaacacagttgta
attatgaatatgcaagggcaaatagtaagatcattctccagtggaaaacgagaaggaggt
gacttcgtatgtactgttgtaagtccacgtggcgaatttatttactgtgttggtgaagat
cttgttctttattgtttttctacatcatcaggaaagcttgaaagaacacttaatatacat
gagaaagatgttataggtttaacgcatcatccgcatcagaatcttttatgttcatatagc
gaagatggtcttttaaaattatggaaaccgtaa

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