Bombus vosnesenskii (yellow-faced bumblebee): 117242791
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Entry
117242791 CDS
T07592
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
bvk
Bombus vosnesenskii (yellow-faced bumblebee)
Pathway
bvk04382
Cornified envelope formation
bvk04512
ECM-receptor interaction
bvk04518
Integrin signaling
bvk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bvk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117242791
04518 Integrin signaling
117242791
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117242791
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117242791
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bvk04147
]
117242791
00536 Glycosaminoglycan binding proteins [BR:
bvk00536
]
117242791
Exosome [BR:
bvk04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117242791
Glycosaminoglycan binding proteins [BR:
bvk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117242791
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117242791
NCBI-ProteinID:
XP_033365607
UniProt:
A0A6J3LJP2
LinkDB
All DBs
Position
Unknown
AA seq
1941 aa
AA seq
DB search
MTRLGLRFVASAVFLAGIVGGQYNHTSWSYNPPPVVPLGRGDIGKPNSTDDDYNISPRWR
AFVTNNEDSEEDRRYLNNQGQGYQGQNYDDRYNRYPDSDDYNQRTDDSGGYQTNYGGLDQ
ESYNQGQDQIPLDPYNQEAGDPYGRSGGYEDSYGRGEAGGEQRSRDSSGDGYDRNYGSRD
DYGRGDPYGQRGYSSGQRGGYGAAGDSDNYPSSYTVVPVPGYKPQRNCTGSACCVPKCFA
EKGSRGPPGVMGPQGPKGQKGFPGTEGLLGPKGEKGDPGPQGLRGPKGDRGKMGIPGFSG
ISGVPGVQGPPGAPGLPGRDGCNGTDGEPGDAGRPGDTGPRGYPGPRGPKGDKGQSGFAG
RFPVGQKGEPGIDGVRGPPGQPGLQGERGFPGPKGDRGPYGPPGLQGPRGEKGNMGLAFE
GPKGDKGQKGEQGPPGSPAVGGFLHPGEEIAGPQGERGEKGDTGERGSDGQKGEQGPIGD
HGIPGTAGMKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLSGRPGQKGEPGR
DGPMGVPGLRGPPGPPGGGKGTPGPPGPKGPQGFPGPTGPRGADGYPGDPGPRGPIGPSG
GPGLAGIPGPEGLPGEKGAKGEPGITGFPGPTGPRGFDGPPGLAGSRGLPGEKGASIMGP
KGMDGAPGRDGEKGQKGERGYAGPRGVPGDVDGIPGAPGEPGLPGEPGTPGKNGIPGFPG
SPGEKGEIGGRCIDCLPGLPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPGSDGLPGPIG
PPGPPGKDGIPGAAGPQGEPGTPAVVTENMLKVEKGDKGVRGPVGRDGPPGLPGPPGEKG
PMGFEGFPGPKGVAGDRGFPGQDGIPGRPCVPGRKGEPGVSVKGEHGEPGRRGETGAKGE
PGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDGLSGDKGLQGISGPPGPP
GSIGAPGPVGPRGLPGPRGDKGNMGPMGFPGEPGREGPRGFPGAAGLKGAKGEVGISVKG
SPGLPGPPGQKGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIPGIGGLPGAPGEKGDTG
PMGPPGPPGVAGIPGIDGNKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSKGYPGRRG
LPGLQGRPGIEGAPGLKGERGEKGAPGFPGLRGMEGKPGRPGLTGPKGDIGHPGLPGLPG
TIGFQGPKGDQGLPGLPGRKGEPGLVSEKGQKGEPGMPGIRGPVGPPGRDGIDGDKGERG
LSCNCLDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVRGFHGSQGDIGPMGPPGEPGTPGI
DGLPGEPGDIGPPGPPGFPGSDGDVGAPGHPGLNGGKGDRGLPGLVGEPGIRGMPGEKGD
RGQPGPTVAIKGEKGEPGMPGLRGVAGEKGDRGEEGLAGYDGEKGDRGTPGPVGNPGPPG
LPGPKGEEGPRGPTGIAGLTIKGEKGLPGLPGKHGREGVPGRPGEKGERGLPGLPGHKGD
QGPYGPVGPQGEKGDMGLMGSPGLPGQDGAPGHRGLPGQEGPKGEKGDNCIPEPGLPGQK
GEPGYPGVSGIDGLPGEKGDRGWPGLEGPPGLDGEKGERGFPGPTGKMGAIGFVGQKGDK
GLDCLEPPMGPKGDRGYPGPTGPPGSPGEKGASGQPGFPGSHGMKGVPGPQGPPGPVGLP
GLQGPVGAPGLPGLQGPVGHPGEPGEPGLPCEAAPDYLTGILLVKHSQTDRVPICDAGHI
QLWEGYSMLSTDGNERSHSQDLGHAGSCVRKFSTMPFLFCDTGNVCNYASRSDRSYWLST
TKAIPMMPIEGTAIEEYISRCVVCEVPANVIAVHSQSLNIPDCPHGWTGLWIGYSFVMHT
GAGAQGGGQSLSSSGSCLEDFRTTPFIECNEEHCHYYSNEISFWMTTIEDRLQFQRPEKQ
TLKAGNLRSRISRCQVCIKNT
NT seq
5826 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagttggt
gggcaatataaccacacatcatggtcgtacaatcctccgcctgttgtaccacttggacga
ggtgatattggaaaaccaaatagtacagacgacgattataatatttcaccacgatggagg
gcttttgttacgaacaacgaagattctgaggaagataggcggtacttaaataaccaaggc
caaggctatcaaggtcagaattacgatgatcggtacaacagataccctgatagcgatgac
tataatcagagaactgatgattccggcggatatcagactaattatggaggcttggatcaa
gaatcctacaaccaaggtcaagatcaaatcccgttggatccttacaatcaagaagctggc
gatccttacggaagatctggaggttatgaagactcttacggaagaggagaagccggagga
gaacaaagatccagagattcttctggcgatggctacgatagaaattatgggtccagagac
gattatggacgcggagacccttacggacaacgcggatactcttcagggcaacgtggagga
tatggcgcggccggagattcggacaattatccgagcagttacacggttgtgccagttcca
ggatacaagccacaacgaaactgtaccggatcggcctgctgcgtgccaaaatgtttcgcg
gagaaaggttccagaggaccgccaggtgtaatggggccacagggacctaaaggtcaaaaa
ggatttcctggaacagaaggtcttttgggaccaaagggagaaaaaggtgatcctggtcct
caaggactacgcggtccgaaaggtgacagaggtaaaatgggtatacctggattctccggt
ataagtggtgttcctggagtacaaggtccacccggagctcctggtctacctggtcgtgat
ggctgcaatggaacagacggtgaacctggtgatgctggtcgtcctggagatacaggtcct
cgcggttatccaggtcctcgagggcccaagggagacaaaggtcaatcagggttcgccggt
aggttccctgtaggtcaaaagggagaaccgggtatagatggtgtcagaggacctccagga
caaccaggattacaaggagagcgtggatttcctggacctaagggtgatcgtggtccttat
ggtccgcctggtctacaaggaccaagaggagaaaagggaaacatgggtcttgcgttcgaa
ggtccgaaaggtgacaaaggtcagaagggagagcaaggacctcctggatcgcctgcagtc
ggcggctttctacatccaggagaagaaatagcaggtccacagggagagcgtggtgaaaaa
ggagacacgggtgaaagagggtcggacggtcaaaaaggagaacagggaccaattggtgat
catggtattcctggtactgcaggtatgaaaggagaaaaaggtcttccaggcgcaccaggt
attcgtggacgggatggtttctctggacctccaggcccgcctggacgcaaaggtgatcga
ggttatgacggattagacggcctttcaggtcgtcctggacagaaaggagaaccaggtcga
gatggacctatgggtgttccaggcttacgaggaccacctggtccacctggaggtgggaaa
ggtacgccagggcctccagggccaaaaggacctcaaggttttccaggacccactggaccg
cgcggtgccgatggatatcccggagatccaggaccaagaggtcctattggaccatcagga
gggcctgggttagcaggtattcctggtccagagggtttaccaggagaaaaaggagcaaag
ggagaacctgggatcacaggattccctggaccaacaggtccccgtggatttgatggtccg
ccaggtttagcaggttcacgagggctgccaggagagaaaggagcgtcgattatgggcccc
aaaggaatggatggagcgcccggtagagatggcgaaaagggacaaaaaggagaacgcggt
tacgcaggaccgcgtggagttcctggcgacgtggatggtattccaggagcgcccggagaa
cctggtttaccaggagaaccgggaacgccagggaaaaacggcattccaggatttccagga
tcacctggtgagaagggagagataggagggcgttgtatagattgtctgccgggattacca
ggaatcaaaggtgatcgtggtttcgatggacaacctggacttcctggtccacgaggtccg
gctggagaacgaggattccccggagaacctggcagcgacggattacctggaccaattgga
ccaccagggcctccgggaaaagatggcattcctggtgcagcaggtccacaaggagaacct
ggtactccagcagtggttacggaaaacatgcttaaagtagaaaagggcgataaaggtgtg
agaggtccggtaggaagagatggtccacctggtcttcctggtccgcctggagaaaaaggt
ccgatgggatttgaaggtttcccaggacccaagggtgttgctggagatcgcggattccct
ggtcaagatggtattcctggaagaccatgtgttcctggtcgaaaaggagaacctggtgtt
agtgtgaaaggagaacatggagaaccaggccgaagaggtgaaacgggtgcaaagggcgaa
cctggtccactaggagataaaggagaacctggtctgtgtccaattccggatgaattaatt
aaaggaattaaaggcgacagaggtgctcccggtgaaaaaggagagcctggtccacccgga
agggatgggttaagcggtgacaaaggtttacaaggtatttcgggcccacctggaccaccg
ggatcaattggtgcacctgggccagttggaccaagaggattaccaggtcctcgtggtgac
aagggtaatatgggaccaatgggtttccctggggaacctggtcgtgaaggacccagaggg
ttcccaggcgctgcagggttgaaaggagcaaaaggtgaagttggtatctcggtcaagggc
agtcctggattgccaggaccaccaggacaaaagggagagaaaggtcttccaggaccacca
ggaaaggaaggtcctgatggtctgccgggtttgccaggattttccggagagaagggtgat
gcaggtattccaggcataggtggtttgcctggtgcgccaggagaaaagggagatactggt
ccgatgggacctccaggcccgcctggtgttgctggaattcctggtatagacggaaataaa
ggtgaaccgggattgccgggcgaggctggcaaaccaggactcccaggattcccaggtatc
aaaggtgatcgtggcgaaccgggtatcgatggatcgaaaggttacccaggaagacgtggt
ctacctggtttacaaggtagacctggtatagaaggtgcacctggtttgaaaggagaacga
ggtgaaaaaggcgcccctggtttccctggattacgtggaatggaaggaaaacctggccgc
cctggattaactggaccaaaaggagatataggtcatcctggtctgcctggtcttcctgga
actatcgggttccaaggacctaaaggtgatcaaggtttaccaggattgccaggacgcaaa
ggagaaccaggtctagtttctgagaaaggacagaaaggtgaaccaggaatgccaggtatc
cgtggtcctgttggtcctcctggtagagatggtattgacggagacaaaggggaacgtgga
ttgtcgtgtaattgtttagacggattgccaggtcttaagggagaacctggtctgccaggt
cgcgatggtttaccaggacctatagggctaaaaggtgacgctggagtaagaggtttccat
ggttctcaaggagatataggaccaatgggtccaccaggtgaacccggaacacctggaatc
gacggattaccaggcgagccaggtgacatcggtccaccgggtccacctggtttccctggt
tcggatggtgatgtgggagctccaggacatcctggcctcaacggtggcaaaggagaccgt
ggtttgccaggtcttgttggggaacctggtatccgtggtatgcctggagaaaaaggtgac
cggggacaacctggaccgacagttgcgatcaaaggtgagaaaggcgaaccaggtatgcca
ggattacgaggtgtagctggagagaaaggagatcgtggcgaggaaggtctagctggttat
gatggcgaaaaaggagataggggcacaccaggtccagttggaaacccaggtccacctggc
ctccctggacctaaaggtgaagaaggtccacgtggacctacaggaattgctggattaact
atcaagggtgagaagggtttaccaggtctgccaggaaagcacggacgagaaggagtacca
ggacgaccaggagagaagggagaacgaggattacctggtttaccaggacataaaggagat
cagggaccttatggacctgtcgggccacagggcgagaaaggagatatgggacttatgggt
tctcccggtttaccaggtcaagatggagctccaggtcatagaggactcccgggtcaagaa
ggtccaaaaggtgaaaaaggtgacaattgtataccagaaccaggtctgccgggacaaaag
ggagaaccaggatacccaggagtttccggaattgatggactccccggtgaaaaaggtgac
agaggttggcccggtctagagggtccacctggtctggatggagagaaaggtgaaagagga
ttcccaggtccaacgggaaaaatgggtgctattgggtttgttggtcagaagggtgacaag
ggtctcgactgcctcgaaccaccgatgggaccaaaaggagaccgtggttatcctggaccg
actggcccgccaggctcgccaggagagaaaggagcttcaggtcagccaggattcccagga
tcgcatggaatgaaaggtgtaccaggacctcaaggaccaccaggtccagttggattacca
ggactgcaaggacctgttggtgctcctggtttaccaggtcttcaaggacccgtgggtcat
ccgggtgaaccaggagaaccaggactaccatgcgaagctgcgcctgactaccttactggt
atcttgctagtaaaacacagtcaaactgacagagtgcctatttgtgatgcaggacatatc
caactctgggaaggatacagtatgttatctacggatggcaatgaaagatcgcactcacaa
gatttaggtcatgccggctcgtgcgtgcgaaagttctcgacgatgccgttcctcttctgc
gacaccggcaacgtttgtaactatgcaagtcgtagcgatcgttcttactggttgtcgacc
actaaagcaattcccatgatgcctattgaggggacagcgatagaggaatacatctccaga
tgcgtggtttgcgaggttccagcgaatgtgatagccgtacacagccagtcattgaatatt
ccagattgtccacacggatggaccgggctttggatcggatacagttttgtcatgcatacg
ggtgccggtgcccagggtggaggacaatccttgtccagttccggatcctgtctggaagat
ttccgtacaacgccatttatcgaatgtaacgaagaacactgccattattactcgaacgag
atcagcttttggatgacgacgatagaggacaggcttcagttccaaaggcctgagaaacag
accttgaaggcaggcaacctcaggtcccgaataagtcgctgccaagtgtgtataaagaac
acgtaa
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