Bombus vosnesenskii (yellow-faced bumblebee): 117242792
Help
Entry
117242792 CDS
T07592
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
bvk
Bombus vosnesenskii (yellow-faced bumblebee)
Pathway
bvk04382
Cornified envelope formation
bvk04512
ECM-receptor interaction
bvk04518
Integrin signaling
bvk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bvk00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117242792
04518 Integrin signaling
117242792
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117242792
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117242792
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bvk04147
]
117242792
00536 Glycosaminoglycan binding proteins [BR:
bvk00536
]
117242792
Exosome [BR:
bvk04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
117242792
Glycosaminoglycan binding proteins [BR:
bvk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117242792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
117242792
NCBI-ProteinID:
XP_033365609
UniProt:
A0A6J3LNU5
LinkDB
All DBs
Position
Unknown
AA seq
1839 aa
AA seq
DB search
MRPRAAATSTNAARGLRPFPVVLRVTCVLALLVVTWIPVTEAVICRDSYKCDCKGIKGTP
GFPGITGPQGPEGLPGDIGPDGPPGPKGEKGAAGEYGGTGEKGYRGDEGIRGFPGAPGIP
GNPGPEGVMGPDGLDGCNGTDGRAGAPGLPGMHGERGQPGPEGDPGIIGEPGDGGINSVG
VKGIRGNPGIDGFEGFQGSYGITGEMGYPGERGDMGYRGPMGLPGMQGEVGETVYGAKGT
VGEQGDRGEPGPPSKDEYKKTDTMYYPVKGSRGEKGMRGDKGGYGRKGEPGIKGPHGRPG
FAGTKGMKGEQGNDGPRGKQGAIGPPGPSGEKGEKGAPGYAGKPGPDGLDGELGEPGNQG
PPGKQGAAGEPGQYIPELDEIIQGNIGIQGDLGPPGNPGEPGIPGLPGKVGYIGPPGPPG
PIGPPGSPGLKGSSIKGEPGQDGLTGEMGLQGPPGAPGIPGLAGPKGFPGISIHGPPGLD
GKPGYPGVPGLPGDRGDHGPQGPKGFPGKGSRIGGPPGERGLPGLPGLPGPDGFPGAPGF
KGVKGLKGDDCGVCTPGLPGRKGEPGDSGLDGYPGTPGYPGLSGLRGFKGVQGKRGIMGP
RGLEGDSGRPGIAGPQGPKGEMGKLTWPDKLTRMPGDIGDKGFPGVEGPRGPRGQPGSRG
DTGIQGPKGEKGDFGPPGFTGRDGFARPDGIPGIPGDNVSIPKEFLRGEPGFPGIPGGKG
PMGDKGGKGEPGESYPPPVINLKGEKGYKGERGDIGEDGAKGVEGWPGDEGFPGLPGISG
SPGISRQGPVGLKGYPGMPGDQGPRGTSGTPGSQGPMGFTGRLGNKGDRGEPGSNQTYGD
YGLMGWSGNKGDVGDPGPRGLQGRPGVDGVQGTKGSKGAPGQEGLTGLQGAKGQRGYSTQ
GPRGFPGMAGQPGMPGRMGDVGITGPYGTPGFDGMKGLKGEIGFIGRRGDDGDAGPMGYS
GRDGAPGQPGPPGPDGADGETGESGPSGRPGPDGMPGIIGAKGQPGDVGPEGVIGIMGLP
GPKGISGDIGPDGLDGLPGESAFSGPQGEVGEPGFMGELGPPGFPGMDGRHGPPGEPGIG
RDGSPGPKGIKGETGFDGFNGLPGPKGEVGDMGPDGLKGPRGIWGLKGKPGAYGIHGLPG
VKGERGPIGPPGYSGPKGKRGLDGDPGQMGLPGMPGDPGPRGLPGLMGAPGPKGMVGEPG
PPSYGESERGDFGTPGLEGLQGEKGIRGEQGFIGLHGRKGMKGDIGFPGPAGFPGVPGFP
GLPGDRGPQGFPGLPGELAEPSEDGLPGLDGLPGTPGIPGQKGAPGEYGYNGPKGIMGDV
GFSRRGPKGLPGDRGPAGFTGFPGAPGLEGLEGIPGLQGPKGEPGDRGLPIFAIKGRQGE
PGLPGFNGRKGIKGEIGEVGIPGREGLPGRRGQHGDDGDEGLSGAMGLPGPKGSKGDNGI
NPFSPFPRKGLLGDVGLPGLPGFPGLPGMIGEQGEDGIPGRKGEPGMEGLPGLPGPKGVV
GSPGYPGLRGAIGRQGPPGSPGIRGSPAPPAPGARNRGFFFARHSQSEMIPVCPRNTVKL
WDGFSFLHIMGEGYSVGQDLGTAGSCLQKFSTMPFTMCNLQNVCDYANKNDYSYWLSTTE
PMPMSMASIPAPEVGRYLSRCSVCEAPTRVIAVHSQSMAIPECPGGWEELWIGYSFLMHR
DAGGRGYGQSLVSPGSCLEEFRTRPFIECHGFGACNYYSTAISYWLTIIKEYEMFRRPIP
QTLKADHTSRVSRCAVCIRRRVTEDQHARTPRPFTPNGQRDQVGNIQYPPPHSYYPNYQY
HKKPPISKTRDPNRRVPYHYRRRGRLRKPERTTESPNAA
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctagggccgcggcgacgtcgaccaatgcagcccgcgggttacgtccgttcccg
gttgtcctgcgagtcacctgcgtccttgccctactggtcgtcacgtggataccggtcacc
gaggctgtgatctgcagagattcgtacaaatgcgattgcaaggggataaaaggtacacca
ggtttccctggtatcactggacctcagggaccagaaggacttcctggtgacatcggacca
gatgggccacctggtccaaaaggtgaaaaaggtgctgctggagaatatggtggtacagga
gaaaagggctacaggggtgacgaaggtatacgaggattccctggagctccaggaataccg
ggtaatcccggtccagaaggtgtaatgggtccagacggtctggacggatgcaacgggacc
gatggacgtgccggtgcaccgggattgcctggtatgcatggcgaacgtggtcaaccaggg
ccagaaggagatccagggatcattggcgagcctggtgacggaggtatcaattctgtgggc
gtgaaaggtattcgaggaaatccaggcatcgacggattcgagggctttcaaggatcgtat
gggatcaccggagaaatgggctatccaggagagaggggagacatgggttaccgcggaccc
atggggttaccaggcatgcaaggtgaagtgggtgaaactgtatatggcgcgaaaggtacg
gtaggtgaacaaggagacagaggagagcctggcccaccgagtaaagatgaatacaagaaa
acagacaccatgtactatccggtgaagggcagtaggggcgagaagggaatgcgaggagat
aaaggtggttatggaagaaagggagaacctggcatcaaaggtcctcacggtcgtccagga
ttcgctggtactaaaggtatgaagggagagcaaggtaacgatggacctagaggcaaacag
ggtgcaataggtccgccaggaccttcgggagaaaagggagagaaaggggctccaggttac
gcaggaaaaccgggacccgatggattagatggagagctgggagagcccggaaaccaagga
ccacctggtaaacaaggagctgcgggagaacctggacaatacataccggaactggacgaa
ataattcaaggaaatattggaattcaaggagatctaggtccgcctggtaatccaggagaa
ccaggaataccaggtttacccggtaaagtaggttatatcgggccacctggtcctccagga
ccgatcggccctcctggatcgccaggactgaaaggatcttccatcaaaggagagccaggg
caagatggtcttaccggagaaatgggtttacaaggtccaccgggtgcaccgggtataccc
ggcctcgccggtccaaaaggttttcctggaatatcgatacacggcccaccaggcttagat
ggaaaacctggataccctggtgttcctggattaccgggagatcgtggtgaccatggcccc
caaggtcctaaaggtttccctgggaaaggaagcaggatcggaggccctccgggtgaacgt
ggtttaccaggacttccaggacttcctggacccgatggatttccaggtgcgccaggtttc
aaaggtgtaaaaggtcttaaaggagacgactgcggtgtttgtacgccaggtctacccggt
agaaagggtgaacctggcgattccggcctggacggatatcctggaacgccaggatacccg
ggattgtccggacttcgtggattcaaaggtgtacagggtaaacggggtatcatgggaccc
agaggattggaaggagacagtggaagaccaggaatcgctggtcctcaaggccctaaagga
gaaatgggaaaattgacatggccagacaaactaactagaatgcctggtgatatcggtgac
aagggtttccctggtgtcgaaggaccaagaggcccgcgaggtcaacctggtagtcgtggt
gatactggcattcaaggacctaaaggagaaaagggtgattttggtcctccagggtttaca
ggacgcgacggtttcgccagaccggatggtattcctggtattccgggtgacaacgtgtcg
ataccaaaagaatttcttcgaggtgagccgggtttcccgggcattccaggaggcaaaggt
ccgatgggtgacaaaggaggaaaaggcgaacccggagaatcttatccgccaccggttata
aatctgaaaggagagaaaggatacaaaggagaacgaggtgatataggagaggacggtgcg
aaaggtgtcgaaggatggcctggtgacgaaggatttccgggactgcctggaatttctgga
tcacctggtatatcgcgtcagggtcctgtaggattaaaaggatatcccggtatgccagga
gatcaaggacctcgcggaacatcgggtacaccaggatcacaaggaccaatgggtttcacg
ggacgcttgggcaacaaaggagatcgcggagaaccaggatcaaatcagacgtatggcgat
tatggattaatgggctggtctggtaacaagggagacgttggtgatcctggtcctagaggt
ttacaaggtagacccggagtggatggtgtgcaaggaacaaaaggtagcaaaggtgctcct
ggtcaagaaggattaactggactacagggagccaaaggtcaacgaggttacagtactcag
ggacctaggggcttccctggaatggctggacaacctggaatgcccggaagaatgggagac
gtcggtattacaggtccctacggaacacctggattcgatgggatgaagggtctgaaagga
gaaatcggtttcatcggacgcagaggtgacgacggtgatgctggaccgatgggctactca
ggaagagatggtgcaccgggtcaaccgggtcctcctggaccagacggtgccgatggtgaa
actggcgaatctggtccttctggtaggcctggtcccgacggaatgcctggaataattgga
gctaaaggacagccgggagacgttggacccgaaggtgttataggaattatgggattacct
ggtccaaaaggtatatctggagacataggaccggacggtttggacggacttccgggtgaa
agcgcgttcagtggaccccaaggtgaggtgggtgagcctggtttcatgggagaactcgga
cctcctggcttccctggcatggatggacgacatggcccacctggtgaaccaggaataggt
cgcgatggctcccctggtccgaagggaatcaaaggtgaaactggctttgacggatttaac
ggactacctggaccaaaaggagaggtgggtgatatgggaccggatggtttgaaagggcca
agaggaatttggggtttaaagggaaagcctggagcatacggtattcacggtttacctggt
gtgaagggtgaacgaggtccgataggaccacctggttacagcgggcctaaaggtaaacga
ggattggatggagatccaggtcaaatgggtttgccaggaatgcctggtgatccgggtcct
agaggattacccggtttaatgggtgcaccaggacccaaaggaatggtaggtgaaccaggt
cctccgtcgtacggtgaatcagaaaggggtgatttcggtactcccggcctcgaaggcttg
caaggtgaaaaaggaatacgcggtgaacaaggtttcatagggttacatggacgaaagggt
atgaaaggtgatattggattccctgggccagctggattcccaggcgtgccaggtttcccg
ggtcttcctggcgatcgaggacctcaaggtttcccaggattacccggtgagttggccgaa
ccatccgaggacggattacctggactagatggactacccgggactccaggaattccgggt
caaaagggtgcacccggagaatacggatataatggacctaaaggaattatgggagacgtt
ggtttcagtagacgtggtccaaagggacttccaggggatcgaggtccagcaggtttcacg
ggtttccctggagctccaggattagaggggttagaaggcatacctggtctacaaggacca
aaaggtgaacctggcgaccgtggactgcctatattcgccatcaaaggaagacagggagaa
ccaggattgcctggatttaacggtagaaaaggaataaaaggagaaattggcgaagtgggc
attcctggacgcgaaggattacccggacgaagaggacaacacggtgacgacggagacgaa
ggtttatccggtgcgatgggacttccaggaccaaaaggatcgaaaggagataatggtatt
aacccattttcgcctttcccaagaaaaggtttactcggtgatgtaggacttccaggactg
ccaggtttccctgggcttccgggcatgataggcgaacaaggagaagacggaattcccgga
agaaaaggagaaccaggaatggaaggacttcccggtcttccaggaccaaagggcgttgtt
ggttctcctggttatcctggtcttcgcggtgcaattggccgacaaggtccaccaggatcc
cccggaatacggggaagtccggcaccaccggcaccaggtgcccgaaacagaggtttcttc
tttgctcgacactctcaatccgaaatgataccagtgtgtccaagaaatacagtgaaactt
tgggacggtttctcgtttttgcacataatgggcgaaggatattctgtcggacaggatctt
ggcaccgctggaagctgccttcaaaaattctccaccatgcctttcacgatgtgcaatttg
caaaacgtatgcgactacgccaataagaacgattacagctattggttgagcacgacagaa
cctatgcctatgtccatggcgtctataccggcaccggaagtcggaaggtacctgtccaga
tgttccgtttgcgaggctccaactcgagtgattgcggtgcacagtcaatccatggctata
ccagagtgtcccggtggttgggaagaactttggatcggatacagtttcctcatgcatcga
gacgcaggcggacgcggatacggtcagtccttggtgtcccctggttcctgtttagaagaa
tttcgcacgagaccgttcatcgagtgccatggttttggcgcgtgcaactattactcaact
gccatatcctactggttaaccatcatcaaagagtacgagatgttccgcaggcctatacca
cagacgttgaaagccgatcacacgtcgcgagtaagtcgttgcgcggtgtgcattcgacgt
cgcgtgacggaagaccaacacgccagaacgccgagacctttcacgccgaatggacagaga
gaccaagtcggcaacattcagtatccaccgccgcattcatattatccaaactaccaatat
cacaaaaaaccgcctataagcaaaacgagagatccgaatagacgcgttccgtatcactat
cgaagaagaggcagactacgtaaaccagaacgaacgacggaatcaccgaacgcggcttaa
DBGET
integrated database retrieval system
