Brucella vulpis: BF3285c1_0082
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Entry
BF3285c1_0082 CDS
T04257
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bvl
Brucella vulpis
Pathway
bvl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bvl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BF3285c1_0082 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvl03021
]
BF3285c1_0082 (rpoD)
Transcription machinery [BR:
bvl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF3285c1_0082 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Imm3
DUF5856
DUF4351
EFhand_Ca_insen
Motif
Other DBs
NCBI-ProteinID:
CUW42786
LinkDB
All DBs
Position
1:complement(75425..77443)
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AA seq
672 aa
AA seq
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MATKVKENEEAEVEREGAADGPLLDLSDDAVKKMIKIAKKRGYVTMDELNAVLPSEEVTS
EQIEDTMSMLSDMGINVVEDDEQDNDREEGNDDEAEEGGDLVEAGGTAVATTTTKKEPTD
RTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGRETMIAGLCESPLSFQAIIIWRDQLN
ESNILLREIIDLETTYAGPEAKQAPVIERVEEEKPRDERPQRRSRDDDDITNVGGDMPVE
DDDDDEDEANLSLAAMEAELRPQVMETLDFIADTYKKLRKLQDQQVEGRLAATGELSSSQ
ERRYKELKDQLIKAVKSLSLNQNRIEQLVEQLYDINKRLVQNEGKLLRLAESFGVRREDF
LKEYQGHELDPNWVERVATLPSRGWKEFAAKEADSIGRLRSEIQNLATETAISIGEFRRI
VNQVQKGEREATIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEY
RRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPE
ELAEKLAMPLEKVRKVLKIAKEPISLETPVGDEEDSHLGDFIEDKNALLPIDAAIQANLR
DTTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHP
SRSRKLRSFLDS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaaggttaaggaaaacgaagaagccgaagtcgagcgcgaaggtgctgccgac
ggtccgcttctcgacctttctgacgatgctgtcaagaagatgatcaagattgcgaagaag
cgcggctacgtcaccatggacgagttgaatgccgtgcttccttccgaggaagtgacttcc
gagcagatcgaagacaccatgtcgatgctttccgatatgggcatcaatgtcgttgaagat
gacgagcaggataatgatcgcgaagaaggcaacgacgacgaggcggaagagggcggcgat
ctggtcgaagccggcggcacggctgttgccaccaccacgaccaagaaagagccgaccgac
cgcacggacgatccggtgcgcatgtatctgcgcgaaatgggttcggtcgagcttttgtcg
cgcgaaggcgaaatcgccattgcaaagcgcatcgaggcaggccgcgaaaccatgatcgcc
gggctttgtgaaagcccgctgagcttccaggcgatcatcatctggcgcgaccagctcaac
gaatctaatattcttctgcgcgaaatcatcgacctcgaaaccacctatgccggtcccgaa
gccaagcaggctccggtgatcgaacgcgtggaagaagaaaagccgcgcgatgaaaggcca
cagcgccgctcgcgtgacgacgacgacattaccaatgtcggcggcgatatgccggtggaa
gacgatgacgacgacgaggatgaagccaacctgtcgctggctgccatggaagccgaactg
cgcccgcaggtcatggaaacgctcgatttcatcgccgatacctataagaagctgcgcaag
ttgcaggaccagcaggtcgaaggccgcctggctgcaacgggcgagctttcctccagccag
gagcgccgctacaaggagctgaaagatcagcttatcaaggctgtgaagtcgctttcgctc
aatcagaaccgtatcgagcagcttgtcgagcagctttacgatatcaataagcgcctggtg
cagaacgaaggcaagctgttgcgcctggccgaatccttcggcgtgcgtcgtgaagacttc
ctgaaggaatatcagggccatgagcttgacccgaactgggtggagcgcgttgctaccttg
ccaagccgtggctggaaggaatttgccgctaaggaagccgattccattggccgtctgcgt
agcgaaatccagaatctcgcaaccgaaaccgctatttccatcggtgaattccgccgtatc
gtcaatcaggtccagaagggcgaacgcgaagcgaccatcgccaagaaggaaatggtggaa
gcgaacctgcgtctggtgatttcgattgccaagaagtacacgaaccgcggccttcagttc
ctcgatctcattcaggaaggcaatattggcctcatgaaagcggtcgataagtttgaatat
cgtcgcggctacaagttctcgacctatgcgacctggtggattcgtcaggcaattacccgt
tccattgccgatcaggcccgcacgatccgcattccggtgcatatgatcgaaacgatcaac
aagatcgttcgtacttcgcgccagatgctgcatgaaatcggccgtgaaccgacgccggaa
gaactggcggaaaagcttgctatgccgctcgaaaaagtgcgcaaggtgttgaagatcgcc
aaggagccgatctccctcgaaacgccggttggcgatgaagaggattcacacttgggcgat
ttcatcgaggacaagaacgcgcttttgccgatcgatgctgccattcaggccaatctgcgc
gatacgacgacccgcgttctcgcctcgctgacgccgcgtgaggaacgtgttcttcgtatg
cgcttcggcattggcatgaacactgaccatacgctggaagaagttggccagcagttctct
gtcacgcgcgaacgtatccgccagatcgaggcaaaggcgctgcgcaagctcaagcatccg
agccgttcacgcaagctgcgttcgttccttgatagctga
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