Brucella vulpis: BF3285c1_1602
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Entry
BF3285c1_1602 CDS
T04257
Name
(GenBank) metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bvl
Brucella vulpis
Pathway
bvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BF3285c1_1602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvl03019
]
BF3285c1_1602
Messenger RNA biogenesis [BR:
bvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BF3285c1_1602
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
CUW44274
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Position
1:1578957..1580633
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AA seq
558 aa
AA seq
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MARSNTTEFVFLPLGGVGEIGMNLAMYGFGPTDNREWLVVDMGVSFAGPEQPGADLILPD
IRYLEAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEDSAPE
IPITIYKAGETFEVGPFRIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPV
IDEARFRAIGEAGVLALICDSTNALREGESPSERQVGESLRELIQNARGRVAITTFSSNV
GRIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMI
LTGSQGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKII
GDEDALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRD
GDMLRLAPGKAEIIDEAPVGRIYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHK
MLDEPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAA
NEAWGKKPVVTVFVNRIR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcccggtccaatactacggaattcgtctttctgccgctcggcggtgtaggcgaaatc
ggcatgaatttggccatgtatggttttggtcctacggataaccgcgaatggctggtcgtg
gatatgggggtcagctttgccgggccggaacagccgggcgccgacctcatcctgccggat
attcgctatctcgaagctgaaaagcataatttgcgcggcattgtcatcacccatgcgcat
gaagatcattttggcgcgttgcttgatctttggccgcgcctgaaagtccccgtctatgca
acgccattcacggctggtctgctggaagccaagcgccagtcggaagacagcgcgccggaa
attccaatcacgatctataaggccggcgagacgtttgaagtcggcccgttcaggattgaa
gccgtcgctgtcacccattcgatcccggagccggtttcgctggccatcaccacgccgctt
ggcacggtggtgcatacgggcgactggaaaatggacccggagccatcgcttggccccgtc
attgacgaagcgcgctttcgcgccataggtgaggccggtgttctggcgttgatctgcgac
tctaccaatgcgctgcgtgaaggtgagtccccatcggagcgccaggtgggtgaaagtctg
cgtgaactgatccagaatgcgcgcggacgtgtggcgatcacaaccttttcctccaatgtg
gggcgtatccgttcgatcacggaagctgcccgcgatgcgggccggcaggttctggtggtg
gggcgttcgatgaagcgcgccatctcggttgcaaccgaacttggttatatggaaggcctg
ccggaatatctcagcgaagaggattacggctatattccgcgtgaaaatgtggtgatgatc
ctgaccggcagtcagggcgaaccgcgcgcggcactggcgaaacttgcccgcgatgagatg
cgcagcctcgccctgacggcgggtgatacggtcatctattcgtcgcgggccattcccggc
aacgaaaaggccattcttgacatcaagaaccggctgatcgatcgcggcatcaagatcatt
ggcgatgaggacgccctcgttcacgtttcaggccatccgcgccgcagtgagttgcgccgc
atgtattcctgggttcgtccgcagattctcgtgccggtgcacggcgaggccgctcatctg
gttgcgcaagggtctctgggcgcgatggagggcatcgagcagatcgcacaggtgcgtgac
ggcgacatgctgcgccttgcgcctggcaaggccgagatcattgacgaagcgccagtgggc
cgcatctacaaggacggcaagctgatcggcgacgaagaagagatcggtatggtggagcgg
cgcaagctcgcctatgtcggccatgtcgcggtatcggttctgctcgaccgggagcacaag
atgctggacgaacccgacctcgtggccttcggcctgcctgaggaggacaggcagggcgaa
ctgatggaagacattctgctggatgcagccatcgaggcgatcgacagcataccgcgcgtt
cgccgcaaggatattgagacggtgcgcgaatccgttcgccgcgccgtccgggctgcggca
aatgaagcctggggcaaaaagccggtagtgaccgtcttcgtgaataggatacggtaa
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