Bacillus vallismortis: B9C48_11940
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Entry
B9C48_11940 CDS
T04948
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bvm
Bacillus vallismortis
Pathway
bvm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bvm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B9C48_11940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bvm03021
]
B9C48_11940
Transcription machinery [BR:
bvm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B9C48_11940
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF2316
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ARM28511
LinkDB
All DBs
Position
complement(2478318..2479439)
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AA seq
373 aa
AA seq
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MADKQTHETETELTLDQVKEQLTETGKKRGVLTYEEIAERMSSFEIESDQMDEYYEFLGE
QGVELISENEETEDPNIQQLAKAEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVNLLSAK
EEITYAQKIEEGDEESKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKF
DYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPT
PEEIAEDMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEATSPSDHAAYEL
LKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKRLKDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaacaaacccacgaaacagaaacagaacttacattagaccaggtaaaagag
cagcttactgaaactggaaaaaaacgtggcgttttaacatatgaagaaattgctgaacgc
atgtccagctttgaaattgaatcagaccaaatggatgagtattatgaatttttaggagaa
caaggtgttgaattaattagtgaaaatgaagaaacggaagatcctaatattcaacagctt
gccaaagccgaagaagaatttgaccttaatgacctcagcgtaccgcctggtgtaaagatc
aatgatccagtccgcatgtaccttaaggaaatcggacgggtaaatcttctttctgctaaa
gaagaaatcacctacgctcaaaaaattgaagagggtgacgaggaatctaaacgcagactg
gctgaagcaaaccttcgtttagttgtcagcattgctaaacggtatgtcggccgcggcatg
cttttcttagacttgatccaagaaggaaacatgggtctcatgaaagcagtcgagaagttt
gactaccgtaaaggatataaattcagtacgtatgcgacttggtggatcagacaggcgatt
acacgcgccatcgctgaccaggcgagaacaatccgtatcccggttcacatggtggaaacc
atcaacaaattaatccgggtgcagcgtcagcttcttcaggatcttggcagagagccgaca
ccggaagagattgctgaagacatggatctgacgcctgaaaaagtccgtgaaatattaaaa
attgctcaagagcctgtttctttagaaacgccgatcggtgaagaagacgattcacatctc
ggtgacttcatcgaagaccaggaagcgacatctccgtcggatcatgcggcatatgagctt
ttaaaagaacagctggaagatgtgctggatacgttgacagatcgtgaagaaaacgtgctg
cgtctccgtttcggtctggatgacgggcgcacaagaactttggaagaagtcggcaaagtg
tttggagtaacgagagagcgtattcgccaaattgaagcaaaagcgcttcgcaaattgaga
catccgagcagaagcaaacgtctgaaggattttctcgaatag
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