Bartonella vinsonii subsp. berkhoffii: BVwin_00260
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Entry
BVwin_00260 CDS
T02470
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bvn
Bartonella vinsonii subsp. berkhoffii
Brite
KEGG Orthology (KO) [BR:
bvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvn03400
]
BVwin_00260 (addB)
Enzymes [BR:
bvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BVwin_00260 (addB)
DNA repair and recombination proteins [BR:
bvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BVwin_00260 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
DUF416
Motif
Other DBs
NCBI-ProteinID:
AGF75184
LinkDB
All DBs
Position
complement(28288..31410)
Genome browser
AA seq
1040 aa
AA seq
DB search
MTYKPRVFSISPGTPFLPHFVDALLSGALIDNFAPNGDIQMALADTLIYVPTRRAARALR
TVFVERSDIKSTFLPTIRPLGDLDEESFLFAENYTNTLYPPIGESERLLLLARLIRPWRE
NLPAHLRAMFGTEEVLIAAHTGDAIWLAQDLAKLMDEIETEAADWSKLNEIVPDMVAEWW
QITLDFLTIVTQSWPQILQERQRSNPVEWRNQALKMHAENLHCTQPHKPILAAGVSGSIP
AVSHLLKVIASLPKGAVVLPGLDLHMDEEQWKALGTINKEKATYHSFDHTENIFSHPQYH
FKKLLSLMKCHRIHVREIGQQSAIKKKRTALLSEAFRPASTTDKWVHIVRDDYENLCADW
SFIEAINEREEALAIAVALRNAIEEPPKNAALITNDRNLARRVSAELQRFGIEANDSGGI
PLAQTLPATLLRLLLENVFQPHDPIAFLSLLKHPLTTLEQNRHRLREMAENFELFVLRGN
TSRINFCECNQFLEKWIETYFHNTSEINVLDQQKCEEAQFLCHLLSQAIEPLASLMKKEK
ECTVNEAAIVTVEVFENFGRDENNSLEHLYQHEAGQALATFLRELVSDQSELTFPLCEWP
AIFSALIASRSVTPSPGGHPRLFIWGTLEARLQTVDTVVIGGLNEGSWPITTRNDAFLSR
QMKMMLTLGPPEQRIGLSAHDFQWAMGMNKVVMSRAIRVNHAPSLPSRWLQRLETVIGKQ
VWKQIRARGENFLHWAKMLDNTNMIASAERPCPVPPLDVRPRHFSVTEIATLRYDPYAIY
AKKILRLKPLKALMHDPCAAERGTLYHAILAAFGTQIKNLSAENALDVLLTLGRKEFDKF
NLPADVETIWWTNFENLAPFILQWEQSLEPRERHTEVVSQKIPIGTTGVTLSGRADRIDV
LANKMVEILDFKTSTPPSSKQVRHLLFPQLALEAALLMKGAFTDFQNLTPSNLFYIPLNG
KGEIIPKSIFSKKGEKEHQNVISLSEKAWEHLITLMEYYNNPQQGYLSHAVPFKKDYEGD
YDHLARLWEWSYGFHKGNQS
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgacctataaaccacgtgtcttttctatttctccgggaactccttttctaccgcatttt
gttgatgcactgctttctggtgcacttattgataactttgcgcccaatggggatatccaa
atggcccttgccgataccctcatttatgtgccaacacgtcgtgctgcccgcgctttacgt
acagtctttgttgaaagaagcgatataaaatcaacctttttgccaaccattcgccctttg
ggagatttggacgaagagagcttcctttttgcggaaaactataccaacactctgtatcct
cctattggagaaagtgaacgcctgctgcttttagcgcgtctcattcgtccttggcgtgaa
aacttaccggctcatttgcgtgccatgtttggtacagaagaagtgcttattgctgcccat
actggcgatgcaatttggcttgctcaggatttagcaaagttgatggatgaaattgaaaca
gaagcagcagattggtcaaaactgaatgaaattgttcctgatatggtagcagaatggtgg
caaataacacttgattttcttaccattgtcactcaaagttggccacaaattttacaagaa
agacaacgaagcaatcctgttgaatggcgtaatcaagctctcaaaatgcatgcagaaaat
ttacactgcacacaacctcataaacctattcttgctgctggtgtatcaggctctattccc
gcagtttctcatcttttaaaggtcattgcttctctacccaaaggagctgttgttcttccg
gggcttgatcttcatatggatgaagaacaatggaaagcattaggcacaattaataaagaa
aaggcaacttatcattcttttgatcatacagagaatatttttagccatcctcaataccat
tttaaaaaacttctctctctcatgaaatgtcaccgcattcatgttcgtgaaattggccaa
caaagtgctataaagaaaaaacgtacagcgcttttatcagaagcatttcgaccagcctct
acaacagataagtgggtgcacattgttcgcgatgattatgaaaacctttgtgcagattgg
tcatttattgaagctatcaacgagcgcgaagaagctcttgccatcgccgttgctttacgc
aatgctattgaagagccccccaaaaacgctgctctcattacaaatgaccgtaatttagcg
cgccgtgtgtccgctgaactacagcgatttggaattgaagcaaatgattcaggaggaata
ccacttgcacaaacgttgcctgcaactctgctaaggcttcttttagaaaatgtgtttcaa
cctcatgacccaattgcttttctttctcttctcaaacatccactcacaacacttgaacaa
aaccgtcaccgcttacgtgaaatggcagaaaattttgaactctttgttctgagaggaaac
acgagccgtatcaatttttgcgaatgtaaccaatttctcgaaaagtggatagaaacatat
ttccacaacacttctgaaatcaatgtccttgatcaacagaaatgcgaagaagcacagttc
ctttgtcatcttttaagtcaagctatcgaacctttagcatctctcatgaaaaaagagaaa
gaatgcactgtcaatgaagctgcaatagtaacagttgaggtttttgaaaattttgggcgt
gatgaaaacaattctcttgaacatctttatcaacatgaagcaggacaagctttagcaact
tttttgcgtgaattggtcagtgatcaatcagaattaacatttcctctttgcgaatggccc
gctatattttcagctctgatagcatcccgttctgtcacaccttcccccggagggcatcca
cgtttatttatttggggcacgttggaagcacgcttgcaaacggttgatacagtggttatc
ggcggtcttaatgaaggatcatggcccataacaacccgcaatgatgcttttttatcacga
cagatgaaaatgatgttaactcttggaccaccagaacagcgtattggtctttccgcgcat
gattttcaatgggctatgggaatgaataaagtcgtgatgagccgagcgataagggttaat
catgctccttcacttccttcacgttggttacaacgtttagaaacagttataggaaaacaa
gtttggaaacaaatccgtgcacgaggagaaaattttctccattgggcaaaaatgctcgac
aatacaaatatgattgcctctgcagaacgcccttgccctgtaccgccccttgatgtacgt
ccacgccatttttcggtcaccgaaatagcaaccttgcgatatgatccttatgccatctat
gctaaaaaaatcttgcgcttaaaaccacttaaggcgcttatgcatgatccttgcgctgct
gaacgtggaacgctttatcacgctattcttgctgcttttggtacacaaataaagaatcta
agtgccgaaaatgcattggatgtattactaactcttggacgaaaagaatttgataagttc
aatttacctgccgatgttgaaacaatctggtggacaaattttgaaaaccttgctcctttc
attcttcagtgggaacaaagtttagagccccgagaaagacataccgaagtcgtatcacaa
aaaataccgataggtacaacaggtgtaactctttcaggacgcgctgatcgtattgatgta
ttagcaaacaaaatggttgaaatccttgattttaaaaccagtacgcctccctcatcaaaa
caagttcgtcatttgttatttccacaattggcactggaagcagctttgctcatgaaagga
gcctttacagattttcaaaatcttaccccctcaaatctattttacatccccctcaatgga
aaaggggaaatcattcctaaatcaattttttcaaagaaaggggaaaaagagcaccaaaat
gtcattagtctcagtgaaaaagcatgggaacatcttatcacattaatggagtattataac
aatccacagcaaggctacctttcacacgcagtcccttttaaaaaagactatgaaggtgat
tatgaccatctggcacgcttatgggaatggtcatatggattccataaaggaaatcaatca
tga
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