Bartonella vinsonii subsp. berkhoffii: BVwin_00510
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Entry
BVwin_00510 CDS
T02470
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bvn
Bartonella vinsonii subsp. berkhoffii
Brite
KEGG Orthology (KO) [BR:
bvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bvn03016
]
BVwin_00510 (ligT)
Enzymes [BR:
bvn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BVwin_00510 (ligT)
Transfer RNA biogenesis [BR:
bvn03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BVwin_00510 (ligT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Acb1
Dynein_heavy
Motif
Other DBs
NCBI-ProteinID:
AGF75209
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All DBs
Position
complement(68931..69470)
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AA seq
179 aa
AA seq
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MQRLFSALQIPQQTTEALISLQNGLPNAQWINSQNFHITLSFFGEVESSVADALIHAFDT
IKLPPFVLQPRGFDVFGSENAPHSLVVRIAPCETLSLLHEKMQCIRSNLNLTPDEKQFIP
HITLARLLDIKPEDLPSYLSSRSDFSFPPFEVNHFVLLLSPSPLSDAPYIVEKSWLLRG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcctgtttagtgctctccagattcctcaacaaacaacagaagcactcatatca
ctgcaaaatggcttgccaaacgcacagtggattaattcgcaaaattttcatatcactttg
tctttttttggcgaagttgagagctccgtagcagatgcacttattcatgcctttgataca
ataaagctccctccttttgtactacaaccaagggggtttgacgtttttggttcagaaaat
gctccacattctcttgttgttcgtattgcgccttgtgagactctcagccttttacatgaa
aaaatgcaatgcattcgcagcaatttgaatttaacacctgatgaaaaacaatttatccca
catattactcttgcgcgattgctcgatattaaacctgaagatcttccttcttatttgtct
tctcgaagtgatttctcgtttccaccttttgaggttaatcactttgttctattattatcg
ccgtctcctttaagcgatgccccatatattgtggaaaaaagttggttacttagaggataa
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