Bartonella vinsonii subsp. berkhoffii: BVwin_03350
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Entry
BVwin_03350 CDS
T02470
Symbol
rumA
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bvn
Bartonella vinsonii subsp. berkhoffii
Brite
KEGG Orthology (KO) [BR:
bvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bvn03009
]
BVwin_03350 (rumA)
Enzymes [BR:
bvn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BVwin_03350 (rumA)
Ribosome biogenesis [BR:
bvn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BVwin_03350 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_15
Methyltransf_31
PabTrmU54_TRAM_dom
Cons_hypoth95
MTS
TRM5-TYW2_MTfase
Methyltransf_25
N6_N4_Mtase
TMEM81_C
Motif
Other DBs
NCBI-ProteinID:
AGF75478
LinkDB
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Position
431042..432295
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AA seq
417 aa
AA seq
DB search
MNGNVIIDHMGMNGHGIVKTLHGLVYVPFTLPGECAEITVHGKYATLKALKGKSPERIDA
LCRHFGECGGCALQHWHPEVYREWKRQLVFDALKEYGLDVVVSPLIECKPYSRRRMTLTA
SMIPQGFRVGFNRHFSHEIVVLEECPVSRPELISKLDDIRILCACLSNYAKRFHITITLV
ENGFDVALSGCAVHNESIRQKMVHIALSCGITRLSVEGEVLIEQEKPLIYFGDVCVEFPA
GGFLQATFEAENMMGDIILTHLKKAKNALDLFSGVGTFTLRMAKKMNVHAVENDERALAN
LDSAARFATGLKTVTCEKRDLFRRPLSVKELECFECVVFDPPRAGAEQQVRELAKTTISR
VVAISCNPITFARDLSLLVAGDYTIEKIIPIDQFLWSPHVEIVALLSKRKAKASWKL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttgaatggcaatgtcataatagaccatatgggaatgaatggtcatggtatcgtcaaaaca
ttacatggtttggtttatgttccttttactttaccaggagagtgtgctgaaatcaccgtt
catggaaaatatgctacactcaaagcattaaagggaaaatcaccagaacgcattgatgct
ctttgtcggcattttggagaatgtggggggtgtgcactccaacattggcatcctgaggtt
tatcgcgaatggaaacgacaattggtttttgatgcgcttaaagagtatgggcttgatgtt
gttgtttctcctttaatcgaatgtaagccctatagccggcggcggatgacactaacagca
tccatgataccacaaggttttagagtcggttttaatcgtcacttctctcatgagattgta
gttcttgaggaatgtccagtaagccgaccagagcttatatctaagctagatgatatcagg
atcctttgtgcttgtttaagcaattatgctaaacgatttcatatcacaatcacacttgtt
gaaaatggttttgatgttgctttaagtggttgtgctgtacacaatgagtcaattcgtcag
aaaatggtacatatagctctttcgtgtgggattacgcgtttgtctgttgaaggtgaagtt
ttgattgaacaagaaaaaccattaatatacttcggagatgtctgtgttgaatttccggct
ggaggctttctccaagcaacttttgaagcagaaaatatgatgggcgatattattttaact
catttaaaaaaagcaaaaaatgctcttgatttattttctggggtaggaacatttacattg
cgcatggctaaaaaaatgaacgtccatgcagtagaaaacgacgagcgagcattagcaaat
ttagattccgcagcacgttttgcaacgggtttaaaaacagtaacttgtgaaaaacgtgat
cttttccgccgtccactttctgtgaaggaacttgaatgttttgagtgtgttgtttttgat
cctccacgcgctggtgcagaacaacaagtccgtgaattggcaaaaacaacaatatctcgt
gtcgtggcgatttcatgcaatcctattacatttgcgcgtgatttatctcttcttgtagca
ggtgattatacaatagaaaaaatcataccaattgatcaatttttatggtcaccccatgtt
gaaattgttgctcttttgagcaaacgcaaagcaaaggcaagttggaagctttag
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