Bartonella vinsonii subsp. berkhoffii: BVwin_06140
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Entry
BVwin_06140 CDS
T02470
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bvn
Bartonella vinsonii subsp. berkhoffii
Pathway
bvn03420
Nucleotide excision repair
bvn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BVwin_06140 (uvrD)
03430 Mismatch repair
BVwin_06140 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvn03400
]
BVwin_06140 (uvrD)
Enzymes [BR:
bvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BVwin_06140 (uvrD)
DNA repair and recombination proteins [BR:
bvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BVwin_06140 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
BVwin_06140 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_11
DUF3553
Tudor_1_RapA
Motif
Other DBs
NCBI-ProteinID:
AGF75732
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Position
complement(754157..756487)
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AA seq
776 aa
AA seq
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MNNFLDHIPFFESSLPSNEKSSGAPIHAGKVKEKTQCDADYLEQLNPEQRQAVMNTEGPL
LVLAGAGTGKTRVLTTRISHILHSGLASPKQILAVTFTNKAAREMKMRIGAFIGEIVEGM
PWLGTFHSTGAKILRRHAELVDLKSNFTILDSDDVLRLLKQLIQAEGLDDKRWPARSFAM
MIDSWKNQGLSPERISESDAHSFGNGMGRKLYRSYQERLKTLNACDFGDLLLHSISLFQH
NPDILREYHSKFRYILVDEYQDTNTAQYLWLRLLAQQSKGQHVNLCCVGDDDQSIYGWRG
AQVDNILRFEKDFPPAKIIRLERNYRSTSHILKTASHLISYNQERLGKTLFSHQINTEEE
KVKIHAAWDSGEEARAIGEEIERAQQNGHSLNHMAILVRASFQMREFEDRFVTLGLNYRV
IGGPRFYERMEIRDAMAYLRVVFQPADDLAFERIINTPKRGLGDATLRTLYESARARAIP
LFSAAAAIIETDELKPKARSALRSIIEDFRRWQNMLPYTPHRELAETILEDSGYTAMWQE
DRSPEAPTRLENLKEMIRSMEQFESLHSFLEHVALVIDAENNETTDAVNIMTLHSAKGLE
FETVFLPGWEEGLFPHQRSLDEGGRLGLEEERRLAYVGLTRAKKHLHIWFVSNRKVHGLW
QPALPSRFLDELPAEHIEVVEMGTSYGGYGKSPFKDHNSFYNDYAPLRQKRIQKNIEGKV
IVQPVAETSSNFSINDRIFHIKFGYGRITAIDDHKLTIMFEKAGEKRVLDNFVSKA
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaataattttcttgatcacataccattctttgaaagctctctaccctccaacgaaaag
agctctggagcccctattcacgctggaaaagtaaaagaaaaaacgcaatgtgatgccgat
tatttagaacaactcaatccagaacagcgacaagccgtcatgaatacagaaggacctctt
ttggttcttgcgggtgctggtacgggaaaaacacgcgttttaacgacccgcatttctcat
attttgcactccggtcttgcttctcctaagcagatacttgctgtaacgttcaccaacaaa
gcagcacgcgaaatgaaaatgcgtattggtgcatttattggtgaaattgttgaaggcatg
ccttggcttggaactttccattccaccggtgcaaaaattttacgccgccatgcagaactt
gttgatttaaaaagcaactttacaattcttgatagcgatgatgtccttcgacttttaaaa
cagcttattcaagctgaaggattggacgacaaacgttggcccgcacgaagttttgcaatg
atgatcgattcttggaaaaatcaaggactttcaccagaacgcatttcagaaagtgatgcc
cattcctttggaaacggcatgggacgtaaactttatcgcagctatcaggagagattaaaa
actcttaatgcttgtgatttcggtgatcttctgcttcattcaatttctctctttcaacat
aatccagatattcttcgcgaatatcactctaaatttcgttatattcttgtagatgaatat
caagatacgaatacagcacaatacctttggcttcgccttttagcacaacaatccaaaggg
caacatgtaaacctttgttgtgttggtgatgacgaccaatctatttacgggtggcgcggt
gctcaagtcgataatatattacgttttgagaaagattttcctcctgcaaaaattattcgt
ttagaacgcaattatcgctcaacatcacacattctcaaaacggcttctcatctcatttct
tataaccaagaaaggcttggaaaaacacttttttctcatcaaataaatactgaagaagaa
aaagtaaaaattcatgctgcatgggattcaggagaggaagcacgtgcaattggagaagaa
attgaacgcgcccaacaaaacggtcattcattaaatcatatggctatattggtgcgtgca
tcattccaaatgcgtgaatttgaagatcgttttgtaacgcttggtcttaactaccgcgtc
atcggtggcccacgcttttatgaacgaatggaaatacgtgatgccatggcttatttacgc
gttgttttccaaccagcagatgacttagcttttgaacgcattattaacacacctaaacgc
ggcttaggagatgcaaccctacgcactctttatgagagcgcacgtgcacgcgctattcct
cttttttctgccgcagcagcaatcattgaaacggacgaactaaaacccaaagcacgcagt
gctttgcgaagcattattgaagactttcgtcgctggcaaaatatgctgccatacaccccc
cacagagaacttgctgaaacaattcttgaggattcaggctacacagctatgtggcaagaa
gatcgctccccagaagcaccaacacggctagaaaatctcaaagaaatgatccgctctatg
gaacaatttgaaagccttcacagctttttagaacatgttgccctcgtgatagatgctgaa
aataatgaaaccaccgatgcggtcaacattatgacacttcattctgcaaaagggcttgaa
tttgaaaccgtttttctgccaggttgggaagagggactctttccccaccagcgctcattg
gatgaaggaggccgtttaggattagaagaagaacggcgactagcctatgtaggtctgaca
agagcaaaaaaacatttgcatatatggtttgtctctaatcgaaaagttcatggactttgg
caacctgcacttccctcccgtttcctagatgaattaccagcagaacacatagaagttgta
gaaatgggaacatcttatggcggttatggaaaatccccttttaaagatcataattccttt
tacaatgattatgctccattaaggcaaaaacgtatacaaaagaacattgaaggaaaagtc
atcgttcaaccagttgctgaaacttcttcaaacttttcaatcaatgatcggatttttcat
ataaagtttggttatggtcgtatcacagcaatagatgaccataaattaaccattatgttt
gaaaaagctggagaaaagcgtgtactcgacaattttgtaagcaaggcttaa
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