Bartonella vinsonii subsp. berkhoffii: BVwin_06820
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Entry
BVwin_06820 CDS
T02470
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bvn
Bartonella vinsonii subsp. berkhoffii
Brite
KEGG Orthology (KO) [BR:
bvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvn03032
]
BVwin_06820 (topA)
03400 DNA repair and recombination proteins [BR:
bvn03400
]
BVwin_06820 (topA)
Enzymes [BR:
bvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BVwin_06820 (topA)
DNA replication proteins [BR:
bvn03032
]
Prokaryotic type
DNA Topoisomerases
BVwin_06820 (topA)
DNA repair and recombination proteins [BR:
bvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BVwin_06820 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AGF75793
LinkDB
All DBs
Position
complement(827544..830105)
Genome browser
AA seq
853 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSQYKVVASFGHVRDLPAKDGSVLPDQDFSMKWSVDSAATK
RLNEIAKAVKEADSLILATDPDREGEAISWHILDILRQKKVLKDKPVKRVVFNAITKKSV
LDAMSNPRDIDISLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRIICDR
ESEIEHFIKEDYWSLTTNLKTIRNDGFQARLTMFNQKKIGKLDIQSQEQADQIRIMLEGA
KYRTLSVEAKPTKRNPSPPFTTSTLQQAASSKLGFSASRTMQVAQKLYEGVEMNGEMAGL
ITYMRTDGVQIAPEAIESARRVIHEAFGNDYIPEKPHFYSTKAKNAQEAHEAIRPTDFQR
TPDYVRNFLDSDQAKLYELIWKRAIASQMCSAEIERTTVEIEAQKGENNANLRATGSVIR
FDGFISVYTDQREEETSEENETTRLPQINAGESLTKEKVEAIQHSTEPPPRYSEASLIKK
LEELGIGRPSTYASTLSTLCDRGYIVMDKRKLIPNAKGRIVTAFLENFFNRYVEYGFTAD
LEEKLDLISDGKLSWKDVMRDFWDEFNASITNIKELRITNVLDVLNVTLAPLAFPLREDG
SDVRSCPLCTNGQLSLKLGRYGAFVGCSNYPECKYTRQLGTETGEENDAMRNDEPLMLGI
DPETGKDISLRNGRFGPYIQLGESKEAKRVGLPKEWQAETITFDKALALISLPRKIGIHP
ETGKMITATIGRYGPYLSHDGKSAPLLHTDEVFDIGINRAVTVLAEKQGNKTTRSRTTPT
ALATLGNHPDGGTITVHNGRYGPYVNWGKINATLPKDKDPISVTLSEALELISSKASGKK
TTSKRASSSKKET
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgttatcgttgaatctccagcaaaagcaaaaacaattaataagtatcttgga
tctcaatacaaagtcgttgcatcatttggacatgttcgtgatttacccgcaaaagatggc
tctgttttacccgatcaagatttttctatgaaatggagtgtagattctgctgccactaag
cgcttaaatgaaatagcaaaagccgtcaaagaggccgatagtctcattttagcaacggac
cctgatcgtgaaggagaagccatttcatggcatattctggatattcttcgtcaaaaaaaa
gttttaaaggataaacctgttaaacgggttgtgttcaatgctattaccaaaaaatctgtg
cttgatgccatgagcaatccgcgtgatattgatatatcactcgtggatgcatatcttgca
cgtcgtgctcttgattatcttgttggttttacactctcccctgttttgtggcgtaaactt
cccggtgcacgttcagctggtcgcgttcaatccgttgcattgcgtattatttgtgatcgt
gagtcagaaatagaacattttatcaaagaagattattggtctcttacaacaaacttaaaa
accatccgaaatgatggtttccaagcaagattaacaatgtttaatcaaaaaaagattggc
aaacttgacattcaatctcaagagcaagcagatcaaattcgcattatgttggagggagca
aaatatcgcacactcagtgttgaagcaaaaccaacaaagagaaatccttctcctccattt
acaacatccactttacagcaagcggcctcttcaaaattaggtttttcagcctctcgtact
atgcaagttgctcaaaaactttatgaaggcgttgaaatgaatggtgaaatggcagggctt
attacctatatgcgtaccgatggtgtacaaatagcaccagaagccattgagtcagcacga
agagtgattcatgaagcctttggtaatgactatattcctgaaaaaccacacttttattca
acaaaagcaaaaaacgcacaagaagcgcatgaagctatccgcccaacagattttcaacgc
actcccgattatgtacgaaatttcctcgatagcgatcaagcaaaactctatgagctgata
tggaagcgcgctattgctagccaaatgtgttctgctgaaattgaacgcacaactgttgaa
attgaagcacagaaaggagaaaataacgcaaatttacgtgcaacaggttctgttattcgt
tttgatggctttatttctgtctacactgatcaacgagaagaagaaaccagtgaagaaaat
gaaacaacacgtttgccacaaattaacgcaggcgaatcgcttacaaaagaaaaagttgaa
gctatacaacatagcacagaaccacctcctcgttattctgaagcttccctcattaaaaag
cttgaagagctaggaattggtcgaccttcaacctatgcatctacattgtccacactttgt
gatcgtggatatattgtcatggataaacgaaagcttattcctaatgcaaaaggacgtatt
gttacagcctttcttgaaaatttctttaatcgctatgtagagtatggttttacagcagat
cttgaagaaaaactggatcttatatcggatggaaaactttcttggaaagatgtaatgcgt
gatttttgggatgaatttaacgcatctattaccaatataaaagaactccgtataaccaat
gttcttgacgttttaaacgtaacattagcacctctcgcctttcctctccgtgaagatgga
agtgatgtccgctcttgtccgctttgtacaaatggtcagttatccttaaagttagggcgt
tatggtgcatttgttggctgttctaattatcccgaatgcaaatatacccgccaacttgga
acagagacaggagaagaaaatgatgccatgcgtaatgatgaaccacttatgcttggtatc
gaccctgaaacaggaaaagatatctctcttcgtaatggtcgttttggcccttatattcaa
ctcggtgaaagcaaagaagctaagcgtgtaggactaccaaaagaatggcaagcagaaact
ataacctttgataaagccttggccttaatatcattgccccgtaaaattggcattcatcct
gaaacaggcaaaatgattacagccactattggacgttatggtccctatctgtcacatgat
ggcaagtctgctcctcttcttcataccgatgaagtttttgatattggtattaatcgcgct
gttacagtgcttgctgaaaaacaaggaaataaaacaacgcgcagtagaacaacaccaaca
gcactcgcaacattaggaaatcacccagatgggggaaccattactgtgcacaatggacgt
tacggtccatatgttaattggggtaaaattaatgcaacattgccaaaagataaagatcca
attagtgtaacactttcagaagcattagaacttatatcctctaaagcatccggcaaaaaa
acaacttcaaaaagagcttcttcttcaaaaaaagagacataa
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