Bartonella vinsonii subsp. berkhoffii: BVwin_08670
Help
Entry
BVwin_08670 CDS
T02470
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bvn
Bartonella vinsonii subsp. berkhoffii
Pathway
bvn03030
DNA replication
bvn03430
Mismatch repair
bvn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BVwin_08670 (dnaE)
03430 Mismatch repair
BVwin_08670 (dnaE)
03440 Homologous recombination
BVwin_08670 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bvn03032
]
BVwin_08670 (dnaE)
03400 DNA repair and recombination proteins [BR:
bvn03400
]
BVwin_08670 (dnaE)
Enzymes [BR:
bvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BVwin_08670 (dnaE)
DNA replication proteins [BR:
bvn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BVwin_08670 (dnaE)
DNA repair and recombination proteins [BR:
bvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BVwin_08670 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AGF75972
LinkDB
All DBs
Position
complement(1029732..1033220)
Genome browser
AA seq
1162 aa
AA seq
DB search
MAEDKNTIREIKKSLPRFIHLRVHSAYSLLEGALKIPQIIQHAISDQTPAVAITDTNNLF
GALEFSQYCFSHGIQPIIGCQLTVDFGDENDNSRFAKWHHPSDLCSLVLLAASEIGYAHL
VRLVSRAYLDKCDTEPPHIKADWLSSHSEGIIALTGGKGGPLNFSLAEGRKERAVERLIS
LKNLFGDRLYVELQRHGSFDRQVEAALIELAYAHEIPLVATNDAFFLKREGYEAHDALMA
VAEGQIVSNPDRKRVTPDHYLKSQDEMVALFSDLPEALENSVEIALRCHTATPIRKPILP
RFIEQSVDSNFALEVEDRELLNQAKAGLKMRLETIGLAEGYTVADYEQRLDYEVSVITRM
QFSGYFLIVSDFIKWAKAHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPD
RVSMPDFDIDFCQERREEVIQYVQKKYGRDQVAQIITFGKLQARAVLRDVGRVLEVPYRQ
VDYLTKLVPATPGSQVELADAIKDEPKFEEEKKKDPVVGRVLDIALQLEGLYRHASTHAA
GIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKTLTVLKMAVDFVA
RKGIQIDLSNISLNDEATYAMMARGETVGVFQVESSGMRKALIGMKPDRIEDIIALVALY
RPGPMENIPTYNARKHGEEEIASIHPKIDHLIQETQGVIVYQEQVMQIAQVLAGYSLGEA
DLLRRAMGKKIHKEMQQQRTRFVEGAVAGGVDKDQADIIFDLLAKFADYGFNKSHAAAYA
IVSYQTAYMKAHHPVEFLAASMTYDMTNTDKLNDFRREALRLGIKVIAPCLQTSHRFFEV
GDNCIYYSLAAIKGVGEAVVDHIVACRGNKPFKDIEDFCERIDPRIVNKRAMESLICAGA
FDCFHIAREILLESLGTLHARALRILDNHSSGQIDIFGMTDGLKEPLILSQTAPWLPDEK
LYREFQVIGFYFSAHPLDEYQDILAKKRVQTWINFANAVKGGAEAARLAGTVVAKQVRKT
KSGKKMGIIHFSDTSGQYETVLFSEGLSDYEEILEPGKSFIITVSAENRSEGISLRLETV
QSLENEDLQRHKMMRLFIKTVDMLPQIEQNLNLGGNGEVGLILIQEDGLREVEITLPKRY
KVNSRVANAMKVIQGVVNVELV
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaagataaaaatacaatacgagagataaaaaaatctcttcctcgctttattcat
ttgagagtgcactctgcttattcgctgcttgaaggggctttaaaaattccgcaaattatt
caacatgcgatttcggatcaaacgccagcagttgctatcactgatacgaataatttattt
ggtgcgttggagttttcacaatattgtttttcgcatgggatacagcctattattggctgt
cagcttaccgttgattttggtgatgaaaatgataattcgcgttttgctaaatggcaccat
ccttctgatttgtgttctcttgttttgttagcggctagtgagatcggttatgctcatttg
gttcgtcttgttagtcgtgcctatcttgataagtgtgatactgaacctcctcatattaaa
gctgattggttatcgtcacacagtgaaggaatcatcgctttaacaggtggtaagggaggt
ccacttaatttttctttggcagaaggaagaaaagaacgtgctgttgaacgtttaatttct
ttaaaaaatctttttggtgatcgtctttatgtggaattacagcggcatggctcttttgat
cgacaagtagaagctgcacttattgagttggcttacgcacatgaaattcctcttgttgca
accaatgacgctttttttctgaagagagaaggctatgaagcacatgatgcactgatggcg
gttgcagaaggacaaattgtctctaatccagatcgtaaacgtgtaacaccggatcattat
ttgaagtcacaagatgaaatggttgcactgttttctgatcttccagaagctctggagaac
agcgttgaaattgccttgcgttgtcatacggccacacccattcgaaaaccaattttgcct
cgttttatagagcagtctgttgattcaaactttgctttagaagtagaagatcgtgaatta
ttaaatcaagccaaggcgggtttaaaaatgcgccttgagacaattggattggccgaagga
tatactgttgcagattatgagcagcggcttgactatgaagtttccgttattacgcgtatg
caattttctggctactttcttatcgtttcagatttcataaaatgggcgaaggcgcatgat
atccctgttggaccgggacgtggttctggtgctggttcacttgttgcttatgctttgact
attaccgatgttgatccattgcgtttttctcttctctttgaacgttttctgaatccagat
cgtgtttctatgccagattttgatatcgatttttgtcaagagcggcgcgaagaagttatt
caatatgttcaaaaaaaatatggacgtgatcaagttgcacaaattattacatttggtaag
ttacaagcacgtgcggtgctgcgtgatgttgggcgtgttttagaagttccttatcgtcaa
gtggattatcttacaaaattagttcctgctacacctgggagccaagttgaattggctgat
gctatcaaggatgagcctaaatttgaggaagaaaagaaaaaagatccggttgtgggacgc
gtgttagatatagcacttcagctggaggggctttatcgtcatgcatcaactcatgcagca
gggattgtcattggtgatcggccactttcagaacttgttcctatgtatcgtgatcctcgt
tccgatatgcctgttacacaatttaacatgaaatatgttgaacaggctgggctggtaaaa
tttgattttcttggattaaaaacgcttactgttttgaaaatggcggtagattttgtcgca
cgaaagggtattcaaatagatttgtcgaatatctctctgaatgatgaagcaacctatgct
atgatggcacgtggtgaaacggttggcgtgtttcaagtggaaagttccggtatgcgtaag
gcattaattgggatgaagccagatcgtattgaagatattattgctcttgtggcgctttat
cgtcctggtccaatggagaatattccaacctataacgcgcgcaaacatggggaagaagaa
attgcttctattcatccgaagatagatcatctgattcaagagacacaaggtgttattgtg
tatcaagaacaggtcatgcaaattgctcaagtgcttgctggttattcgcttggggaggcg
gatttattacgtagggctatgggcaaaaaaattcataaagaaatgcaacaacaacgtacg
cgctttgtagagggagctgttgctggtggtgttgataaggatcaagctgatattattttt
gatcttttagcaaaatttgcagattatggttttaataaatcgcatgccgctgcttatgcg
attgtttcttaccaaacagcttatatgaaagcacatcatccagttgagtttttagctgct
tcaatgacgtatgatatgacaaatacggataaattaaatgattttcggcgtgaagcatta
cgattgggtattaaagtgattgcaccttgtttgcaaacatcacatcggttttttgaagtt
ggtgataactgtatttattattctcttgctgccattaaaggtgtgggagaagcggtcgtc
gatcatattgtagcttgccgtggaaataaaccttttaaggatatagaagatttttgtgag
cgtattgatccccgtattgttaataagcgtgcaatggaaagtttgatttgtgctggcgcc
tttgattgctttcatattgcacgtgagattttattggaaagtcttggaactcttcatgca
cgtgcacttcgtattcttgataatcattctagtggacagattgatatatttgggatgacg
gatgggttaaaagagcctttgattttatcgcaaacagctccttggttaccagatgaaaaa
ctttatcgagagtttcaagtaataggtttttacttttctgctcatcctttggatgagtat
caggatattcttgctaaaaaacgcgtacaaacttggattaattttgctaatgctgtcaaa
ggaggagcagaagctgctaggcttgctggaactgtcgtagcaaaacaagtacgtaaaaca
aaatctggtaagaaaatggggattattcatttttctgatacgagtggtcagtatgagaca
gttctcttttccgagggactttcggattatgaggagattctagagccagggaaatctttt
atcattacagtgagtgcagaaaatcgctctgagggcatcagtttgcgacttgagacagtt
caatctttggaaaatgaggacttacaacgtcataaaatgatgcgcctttttatcaaaaca
gttgatatgcttccgcaaattgagcagaatctaaatcttggtggaaatggggaagtggga
cttattctcattcaagaggatggattacgtgaagtcgaaattacgcttccaaaacgatac
aaggttaattcacgtgtggcgaatgctatgaaagtgatacaaggtgttgtcaatgtggaa
ttggtttaa
DBGET
integrated database retrieval system
