Bartonella vinsonii subsp. berkhoffii: BVwin_10030
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Entry
BVwin_10030 CDS
T02470
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bvn
Bartonella vinsonii subsp. berkhoffii
Pathway
bvn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BVwin_10030 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvn03400
]
BVwin_10030 (uvrB)
DNA repair and recombination proteins [BR:
bvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BVwin_10030 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BVwin_10030 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
Microtub_bd
SWI2_SNF2
eIF3_p135
DUF87
UB2H
Motif
Other DBs
NCBI-ProteinID:
AGF76104
LinkDB
All DBs
Position
1202368..1204542
Genome browser
AA seq
724 aa
AA seq
DB search
MKNGVTATVEALSALIASGNPLFKNGVLWTPHRPVRPEKSEGGIPFQLNTSFEPAGDQPK
AIKTLVEGIEKNERTQVLLGVTGSGKTYTMAKTIEKTQRPALILAPNKTLAAQLYGEFKN
FFPHNAVEYFISYYDYYQPEAYVARSDTYIEKEASINEQIDRMRHAATRAVLERDDVIIV
ASVSCIYGIGSVETYTAMTFKIEKGDKLNQRKLLTDLVAQHYRRQDINFIRGSFRVRGDT
IEIFPAHLEDRAWRISLFGDEVETITEFDPLTGQKTDNLQSIKIYANSHYVTPRPTLNQA
IKSIKMELVQRLDELNAAGRLLEAQRLEQRTIFDLEMLETTGSCSGIENYSRYLTGRKPG
EPPPTLFEYIPNNALVFIDESHVTIPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRF
EEWDAMRPQTIAVSATPGRWEIEQSRGIFAEQIIRPTGLIDPSTEVRPAHNQVDDVVNEI
RKTIHKGYRTLVTVLTKRMAEDLTEYLHEQGIRVRYMHSDIDTLERIEILRDLRLGTFDV
LIGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADTMTG
SIERALRETQRRRQKQIAYNEEHHIKPTSIKKNISDILNLVCENEHTPTNIPDFMMQNNR
TGNSLALHIQHLEKSMREAAADLNFEEAARLRDEIKQLQKIELAIANDPLTHHSEQSIRN
YMIE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatggtgttactgcaacagttgaagctctttccgcactgattgcctcggggaat
cctctttttaaaaatggagtcttatggactccccaccgtcctgttcgccctgaaaaatct
gaagggggcattccatttcaactcaacacatcctttgaaccagcaggggatcaacctaaa
gcaatcaaaactttggttgagggaattgaaaagaatgaacgtacgcaagtgcttttgggc
gttactggatcaggaaaaacttacacaatggccaaaaccattgaaaaaacgcagcgtcca
gctttgatcttagcacccaataaaactctagcggcacaactttacggagaatttaaaaat
ttttttccccacaatgccgtagaatattttatttcctattacgactattatcagccggaa
gcctatgttgcacgctctgacacttatattgaaaaagaagcctcgattaatgaacaaatc
gaccgtatgcgccatgctgcaacacgcgctgtccttgaacgtgatgatgtcattattgtt
gcatctgtatcctgtatttacgggattggttcagtagaaacctatactgcgatgactttc
aaaatagaaaaaggtgacaaactcaatcaacgaaaattactgactgatttagttgcgcaa
cattatcgtcgacaagatatcaattttattcgcggttcctttcgtgtccgtggagataca
attgaaatttttcctgcccaccttgaagatcgcgcttggcgtatttctctttttggtgat
gaagtagaaacaattactgaatttgatccactcacaggacaaaaaacagataaccttcaa
tctattaaaatttatgccaattcacactacgtaacaccgcgccccacattaaatcaggca
ataaagtcaatcaaaatggaacttgttcaacgcctcgatgagttgaatgcagcaggacgt
cttttagaggcacaacgtttagaacagcgtacaatttttgatttggaaatgttagaaaca
accggctcctgttcgggaattgaaaattattcacgctacttaacaggaagaaaacccggt
gaaccaccgccaaccttgtttgaatatattccaaacaatgctcttgtttttattgacgaa
agccatgtcacgataccccaaattggaggtatgtaccgaggagactttcgaagaaaagca
accctagcagaatatggatttcgcctcccttcctgtatggacaatcgtcctttacgtttt
gaagaatgggatgccatgcgcccacaaactattgctgtctccgcaacacctggacgctgg
gaaatagaacaatctcgaggcatttttgctgaacaaattattcgtccaacaggccttatt
gatccctcaacagaagttcgcccagcgcacaatcaggttgatgatgttgtgaacgaaatt
cgcaaaacgattcataaaggctaccgtacattggtaactgtcttgaccaagcgtatggcc
gaagatttgacagaatatctccacgaacaaggtatccgcgtacgctatatgcattctgat
attgatacattagaacgcattgaaattctacgtgatcttcgacttggcacctttgatgtc
cttatcggcatcaacctgcttcgagaaggcttagatattccagaatgtggttttgtcgcc
attctagatgccgataaagagggttttctgcgctctgaaacttcactcatacaaacaatc
ggacgtgctgcacgtaatgtagatggccgtgttatcctctacgccgatacaatgacgggt
tccatagaacgagccttacgggaaacacaaagacgtcgacaaaaacaaatcgcttataat
gaagaacaccatatcaaaccgaccagtatcaaaaaaaatatcagcgatattcttaattta
gtgtgtgaaaatgagcatactcctacaaatattcctgattttatgatgcaaaacaatagg
accggcaacagtttagcacttcatattcaacatctcgaaaaatcaatgcgtgaagcagcc
gccgaccttaattttgaagaagcagcacgccttcgtgatgaaatcaaacaactacagaaa
atcgaattggcaattgcaaatgatcccttaacacatcatagcgaacaatccatccgaaac
tacatgatagaataa
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