Bartonella vinsonii subsp. berkhoffii: BVwin_10240
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Entry
BVwin_10240 CDS
T02470
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bvn
Bartonella vinsonii subsp. berkhoffii
Pathway
bvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BVwin_10240 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvn03019
]
BVwin_10240 (pcnB)
Enzymes [BR:
bvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BVwin_10240 (pcnB)
Messenger RNA biogenesis [BR:
bvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BVwin_10240 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Gad2
Motif
Other DBs
NCBI-ProteinID:
AGF76124
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Position
complement(1224616..1225866)
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AA seq
416 aa
AA seq
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MNRRQNFKHVKWLQHSDIQTLLRVLSLNGEEARIVGGAVRNQLLGQPISDIDIATTCLPQ
QIIMCVEEAGFKAIPTGIAFGTVTVVSPLCSYEVTTLRSDIETDGRHAKVAFGRDWQKDA
ERRDFTINALYCDAAGRLYDDVGGLNDIASRTVRFIGIAENRIREDYLRILRFFRFFAWY
GVGRPDVQGLKACVSLKEGLQKLSSERIWAEMKKLLAASDPTRALLWMRQSRILTRIFPE
TEKWGIDAIHSLVKAEKVLGWKIDPLLRLESLLPPDPIRLHEMAQRLRFSHKETTRLKEW
AELKMIHQNCSEGEVQKLIYFHGRQPVLDQLSLRMAAAHVDALEGEEALQKENYIKLYHL
AQNWQVPTFPVNGKDLMEQGLSKGVLLGKKLKELERIWIESGFLLDRNALLEKINV
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagaagacaaaatttcaaacacgttaaatggttacagcatagtgacattcaaaca
cttcttcgcgttttgtctttaaatggtgaagaggcgcgtattgtcgggggagctgtgcgc
aatcagctgttagggcagcctattagtgatattgacattgcaacaacctgcttgccacaa
cagattataatgtgtgtagaagaagcaggatttaaggctattcctacagggattgcgttt
ggtaccgtgacagtggtttctcctttatgttcttatgaggtaacaacgcttcgctctgat
attgaaacggatggccgtcatgcaaaagtggcattcggtcgtgattggcaaaaagatgcg
gaacggcgggattttacgattaatgcactttattgtgatgctgctggccgcctttatgat
gatgtgggaggtttgaatgatattgccagccgaacagtacgttttatcggtattgcagaa
aatcgtattcgtgaagattatttacgtattttgcggttttttcgcttttttgcttggtat
ggagtaggacgtcctgatgtgcaaggattaaaagcatgtgtgagtttaaaagaggggcta
caaaaactttcctctgagcgtatttgggcagagatgaaaaaacttctcgctgcttcagat
ccaacacgtgctcttttatggatgcgtcaaagtagaattttgacacgcatttttcccgaa
acagaaaaatggggcattgatgcaattcactcattggtaaaagcagaaaaagttcttggt
tggaaaatagatccattgttacggttggaaagtcttctccctcctgatcctatacgcctt
catgaaatggcacagcgtttgcgtttttctcataaggaaacaacgcgattaaaggaatgg
gcagagttaaaaatgattcaccaaaactgttcagagggggaggtgcaaaaactgatttat
tttcatggtcgtcagccagttttggatcaattatccttgcggatggcagcagcacatgtt
gatgctctagaaggagaggaggctttgcaaaaagaaaattatatcaagctttatcatctt
gctcaaaactggcaggttcccacttttcctgttaatggcaaggatttgatggagcagggt
ttgtccaaaggggtgcttttgggaaaaaagcttaaagagctggaaaggatatggattgaa
agtggatttttattggatcgtaatgcattgttagaaaaaattaatgtgtaa
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