KEGG   Bartonella vinsonii subsp. berkhoffii: BVwin_15070
Entry
BVwin_15070       CDS       T02470                                 
Symbol
pdhD2
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bvn  Bartonella vinsonii subsp. berkhoffii
Pathway
bvn00010  Glycolysis / Gluconeogenesis
bvn00020  Citrate cycle (TCA cycle)
bvn00260  Glycine, serine and threonine metabolism
bvn00280  Valine, leucine and isoleucine degradation
bvn00310  Lysine degradation
bvn00380  Tryptophan metabolism
bvn00620  Pyruvate metabolism
bvn00630  Glyoxylate and dicarboxylate metabolism
bvn00640  Propanoate metabolism
bvn00670  One carbon pool by folate
bvn00785  Lipoic acid metabolism
bvn01100  Metabolic pathways
bvn01110  Biosynthesis of secondary metabolites
bvn01120  Microbial metabolism in diverse environments
bvn01200  Carbon metabolism
bvn01210  2-Oxocarboxylic acid metabolism
bvn01240  Biosynthesis of cofactors
Module
bvn_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bvn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bvn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bvn_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bvn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    BVwin_15070 (pdhD2)
   00020 Citrate cycle (TCA cycle)
    BVwin_15070 (pdhD2)
   00620 Pyruvate metabolism
    BVwin_15070 (pdhD2)
   00630 Glyoxylate and dicarboxylate metabolism
    BVwin_15070 (pdhD2)
   00640 Propanoate metabolism
    BVwin_15070 (pdhD2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BVwin_15070 (pdhD2)
   00280 Valine, leucine and isoleucine degradation
    BVwin_15070 (pdhD2)
   00310 Lysine degradation
    BVwin_15070 (pdhD2)
   00380 Tryptophan metabolism
    BVwin_15070 (pdhD2)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BVwin_15070 (pdhD2)
   00670 One carbon pool by folate
    BVwin_15070 (pdhD2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bvn04147]
    BVwin_15070 (pdhD2)
Enzymes [BR:bvn01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     BVwin_15070 (pdhD2)
Exosome [BR:bvn04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   BVwin_15070 (pdhD2)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 GIDA FAD_oxidored HI0933_like FAD_binding_2 Lys_Orn_oxgnase AlaDh_PNT_C FAD_binding_3 DAO Thi4 3HCDH_N Amino_oxidase ThiF
Other DBs
NCBI-ProteinID: AGF76573
LinkDB
Position
complement(1778300..1779706)
AA seq 468 aa
MSYDVVVIGAGPGGYVAAIKAAQLGLKTAIIEKRTTLGGTCLNVGCIPSKALLHASEVFA
ETQHGFETLGISIAKSKLNLDQMMAHKKAVVTANTSGVSFLMKKNKVDTFFGTAKILAAG
QIEVVARDGNKQTIATKNIIIATGSESSSIPGVNVEIDEKVVVSSTGALALEKVPTRMII
VGAGIIGSELSSVWSRLGAKVTIIEYLNKVLGSMDGEVSRQFQKIMEKQGIEYKTGVKVT
AITQSGSGAQVSFEAVKGGESETLEADVVLIATGRSPYTEGLGLVETGVKVDERGFIDID
AYWQTNIPGIYAIGDVVKGPMLAHKAEEEGVAVAEILAGQKGHVNFDVIPSVVYTQPEIA
SVGKTEEELKAAGIDYNVGKFPFMANGRARAMQKSDGFVKILADKKTDRVLGGHILGFGA
GEMIHEIAVLMEFGGSSEDLGRCCHAHPTLSEAVREAALATFAKPLHI
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgtcttatgatgtggttgtgattggagcaggaccgggtggttatgtcgcagcaataaaa
gcagcgcaactgggccttaaaacagcaattattgaaaagcgtacaacgttggggggcaca
tgtcttaatgttggctgtattccttctaaagcattgctacatgcttcggaagtgtttgct
gaaacgcaacatggctttgaaacacttggtatttctattgcaaaatctaagcttaatctt
gatcaaatgatggcgcataaaaaagctgttgttacagccaataccagtggtgtctctttc
ttgatgaaaaagaataaagttgacactttttttggtacagccaaaattttagccgcaggt
caaattgaagttgttgctagggatggtaacaaacaaacgattgcaaccaagaatatcatt
attgctacggggtcagagagttccagcattccgggtgtgaatgtcgaaatcgatgaaaag
gttgttgtttcttctacaggggcacttgcccttgagaaagtaccaacgcgcatgattatt
gttggtgctggtattattggttcagagcttagttcagtttggagtcgtttaggcgctaaa
gttactattattgaatatcttaacaaagttttagggtcaatggatggtgaagtttcacga
cagttccaaaagataatggaaaaacaggggattgaatataagactggtgtaaaagtgaca
gctattacgcaatctggttcaggagctcaagtgagctttgaagcggttaaaggtggggaa
tctgaaactttagaggctgatgttgtactcattgctactggacgttctccatacacggaa
ggtcttggtttggtagaaactggtgttaaagtagatgagcgtggttttattgatatcgat
gcgtattggcagacgaatattccaggaatttatgcaattggtgatgttgttaaaggacca
atgttggcgcataaggcggaggaagaaggtgttgctgtggcagaaattttggcgggtcaa
aaaggacatgttaattttgatgtcattcctagtgttgtttatacacaaccggaaattgcc
agtgtaggaaagacagaggaagaactgaaagccgccggtattgattataatgttggtaag
tttcctttcatggctaatggtcgtgcacgtgcaatgcaaaagagtgatggatttgttaaa
attcttgccgataaaaaaacagatcgggttttgggcggtcatattcttgggtttggtgct
ggtgagatgatccatgaaattgctgtcttaatggaatttggtggttcatcagaagattta
ggacgttgttgccatgcgcatcctactttatcggaagccgtacgagaagcagctttagca
acatttgctaaacctctgcatatttaa

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